| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1062 |
|---|
| Symbol | |
|---|
| ID | 4482301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1299712 |
|---|
| End bp | 1301238 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721810 |
|---|
| Product | cytidyltransferase-like protein |
|---|
| Protein accession | YP_864986 |
|---|
| Protein GI | 117924369 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCTT CACTCAAAGT GTTAACCCTT GATCAGTTAG CGGCTCAGTG CCAAACCCTG
CGCATGCAGG GGCAGCGCAT TGTGCAGTGC CATGGCACCT TTGATCTGCT GCATCCAGGT
CACATGCGCC ATCTGCAACG GGCCCGTGAG CAGGGTGACG TGCTGGTGGT TACTTTGACC
GCCGACGGTT TTGTCAACAA AGGCCCCAAC CGCCCGGTAT TTCCTGAGCA CCTGCGTGCG
GAATCGTTAG CCTCGCTCAC CTATGTGGAC TATGTGGCGG TTAATTACGA CCTTACGGCG
GTACCCGCCA TCACCAAGGT ACGCCCCAAT GTTTATGTTA AAGGACAGGA CTATAAACAG
GCCAAGGATG ATATTACCGG CAATATCGCC CTAGAACGCC ACGCGGTCGA AGTCCATGGC
GGCGAAATCT TTTTTACCGA AGAGATTGTC TTTAGCTCCA GTTCATTAAT TAATGACTAT
CTGGATGTCT TCCCCCCGGC CACCAAAGAT TTTTTAGACC AGTTTAAAAA GCGCTGGCCG
CCACAGCGGG TGATTGATGC GGTGCGCACC TTTGCCGACA TGAAGGTGCT GGTGGTAGGC
GAGGCCATTA TTGATGAATA TTGCTACACC ACCCCCATGG GCACCATCGG TAAGGGGGGT
AATATTATTG CCACCCGTTA TAATGATAAA GAGATCTTTG CGGGGGGCTC ACTCGCCATT
GCCAACCACC TCTCTGGTTT TGTTAAAGAG GTCGCTTTGC TTACCGGTAT TGGCCCCAAC
TGTCCCCATG AACCCTTTAT GCGCCAGCAG TTGCAGGAGA ATGTACACCC CCATTTTTTC
CACTATGAAG AGGCGCCAAC CCTGGTTAAG CGCCGCTATG TGGATGAGAC GGCCAAACTG
TTTGAGATCT ACTACTACGA CCCCTCCCCT TTAACAGAGG AGGTCGATCA AGGGCTGTGC
GCCTGGATAC GCCAGCACGC CCCAGATTAT GATTTGGTGG TGGTTCCCGA CTACGGCAAC
GGCTTTATCA GCCCAGCCAT GGTGGACGCC CTGTGTGACG CGGCCCCCTA TCTGGCGGTC
AATACCCAGA TTAACAGTGG CAACCGGGGT TATCATGTGA TCAGCCGCTA TCGGCGTGCG
GATTTTGTCT CCCTCAATGA GCCAGAGGTT CGGTTGGCGG CGCACAACCG CCGTGATCCG
TTGGAAACGG TCGCCTTGCA GATCGGCCAC CAGGTACACG CCAAACAGAT GTCCATTACC
ATGGGTACCA ATGGCGCAAT GATGTTGGAT ATTGAGCAGG ATCAGGCCAT GCGCATACCG
GCGCTGGCCA CCCAAGTGGT GGATATTATC GGGGCGGGAG ATGCCTTTTT AACCTTGGCG
GCACTGGCGG CCCGGGCGGG ACTCGCCACC GAGCTAGGCG CCTTTTTGGG CAGTACGGCG
GCGGCGTTGG ATCTGCAAAT TGTCTGTAAC CGCAGCTTTG TTACCCCAGA GGCACTCTTA
AAATTTGCCA CTTCACTGCT TAAATAG
|
|---|
| Protein sequence | MAPSLKVLTL DQLAAQCQTL RMQGQRIVQC HGTFDLLHPG HMRHLQRARE QGDVLVVTLT
ADGFVNKGPN RPVFPEHLRA ESLASLTYVD YVAVNYDLTA VPAITKVRPN VYVKGQDYKQ
AKDDITGNIA LERHAVEVHG GEIFFTEEIV FSSSSLINDY LDVFPPATKD FLDQFKKRWP
PQRVIDAVRT FADMKVLVVG EAIIDEYCYT TPMGTIGKGG NIIATRYNDK EIFAGGSLAI
ANHLSGFVKE VALLTGIGPN CPHEPFMRQQ LQENVHPHFF HYEEAPTLVK RRYVDETAKL
FEIYYYDPSP LTEEVDQGLC AWIRQHAPDY DLVVVPDYGN GFISPAMVDA LCDAAPYLAV
NTQINSGNRG YHVISRYRRA DFVSLNEPEV RLAAHNRRDP LETVALQIGH QVHAKQMSIT
MGTNGAMMLD IEQDQAMRIP ALATQVVDII GAGDAFLTLA ALAARAGLAT ELGAFLGSTA
AALDLQIVCN RSFVTPEALL KFATSLLK
|
|---|
| |