Gene Mmc1_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0999 
Symbol 
ID4481164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1229561 
End bp1230328 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID639721747 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_864923 
Protein GI117924306 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC GTAAATTGCC CGAGAGAAAG CGGCTGGATG TGGGGGATAA CCCCTTTTGG 
ATCAGCTATG CCGATTTGAT GACCGCCTTG GTGATGCTGT TTTTGGTGGT GATGAGTATC
TCGATGATCG CGGTGGCCTC GCGGGATGAG GTGCGCCAAA ACCAGCGCAA AGATGAGATC
ACCAAGGTGT TTGACGCCTT GGAGCAGAGT GCGGCACAGT CCAACCTGCC TCTGGTGATC
AACCGTAAGG AGCAGACCCT CAGTTTTGGC AACAGCGCGC GCTTTGAGCT GGATAGTTTT
TATCTTTCGG CTCAGGTACG TCAGCAGCTT AAAGATTTTG TGCCGATGTT GCTGAAGGTG
CGCAAAAAGG GTGAGGGTAA ATGGTTAAAA CGGGTCCACA TTGAGGGCTA TACCGATGAT
ATTGGAACCT ATTTGTACAA TGTGCGTTTG AGCATGAACC GTGCCCAGGC GGTGCTCTGT
ACCCTGATGG AGGCCGAGGT TAGTGAGGCG CAACGGCGTG AGTTGCAGCG CATGATTATC
ATTGATGGGG CGGCTTCCAC CAGCATCCGT AGCAGCCGCG AAGAGAGCCG TCGGGTCGAG
ATCCGATTGG AATTTTTACG GCATGATGAG GTGCTAGCGG CGCAACCGGA GTGGGAGATG
CCCTTGGGGC GCTGCCCCAT CCCGCTGGAG CCGGAGGTTG GCGAGAAACC CAAGGTGTTG
GATGAACCAC TGCCACCCTT TCCCGGTACC ACCAACCGCG AGGAGTAA
 
Protein sequence
MNLRKLPERK RLDVGDNPFW ISYADLMTAL VMLFLVVMSI SMIAVASRDE VRQNQRKDEI 
TKVFDALEQS AAQSNLPLVI NRKEQTLSFG NSARFELDSF YLSAQVRQQL KDFVPMLLKV
RKKGEGKWLK RVHIEGYTDD IGTYLYNVRL SMNRAQAVLC TLMEAEVSEA QRRELQRMII
IDGAASTSIR SSREESRRVE IRLEFLRHDE VLAAQPEWEM PLGRCPIPLE PEVGEKPKVL
DEPLPPFPGT TNREE