Gene Mmc1_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0988 
Symbol 
ID4482981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1211166 
End bp1212587 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content53% 
IMG OID639721736 
ProductL-glutamine synthetase 
Protein accessionYP_864912 
Protein GI117924295 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0149677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.900766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA AGGAAGCGGT AAATAAAGTT CTGGGCATGA TCGATGCCAA CAATGTGCGC 
TTTGTTGATT TTCGATTCAC CGATTTTAAA GGCAAGTGGC AACACATTAC GGCCCCCGCT
CGCATGTTGA CCGAAGATGT TTTTGAAACC GGACTCGGTT TCGATGGCTC ATCCATCACG
GGGTGGTGTG AGATCAACAA CTCCGACATG GCCTATGTAC CCGATCCTGA ATCGGCTGTC
ATGGATCCCT TCTCCGAGGA CGCTACCCTG ATCCTCGCTT GTAACATCAT CGACCCCTTC
ACCGGTGAAG ATTACAGCCG TGACCCCCGC TCCGTGGCCA AACGCGCCGA GGCTTACCTG
GCCTATACCG GTATTGCTGA CACCGCCTAT GTGGGTCCCG AAGCTGAGTT TTTCGTGTTC
GACTCCGTGC GTTACAATGT GGGCATGAAC AACGTCTCTT ACCACATTGA TTCCGAAGAG
GGCGCTTGGA ACACCGGCAC CGAGTATGAG GATGGCAACA CCGGCCACCG TCCTGGCATC
AAGGGTGGTT ATTTCCCCGT ACCACCTGTG GACTCTCTGC AAGAGATGCG TAATGAGATG
TCCAACCTGA TGGAAGAGAT GGGTCTAACC ATCGAATTCC ACCACCACGA AGTGGCCACC
GCCGGTCAGT GTGAAATTGA CATGCGTTTT GGTACCATGC TGCACACCGC TGACAACATT
CAGAAATATA AATATGTTGT TCACAATGTG GCCCACCAGT ATGGCAAGAC CGCAACCTTT
ATGCCCAAGC CTATGGCGGG TGACAACGGT TCTGGCATGC ACTGCCACAT GTCGATCTGG
AAAGATGGCA AGCCCCTGTT TGCCGGCAAC CAGTATGCCG ACCTCTCTGA GATGGCTCTG
CACTTCATCG GCGGCATCAA GAAGCACGCG AAGGCTCTGA ACGCTTTCAC CAACCCCTCC
ACCAACTCCT ATAAGCGTCT GATCCCCGGC TTTGAAGCTC CCGTGCTGTT GGCCCACTCC
AGCCGCAACC GTTCTGCTTC GATCCGTATT CCCGCTTCTA ATAGCCCTGC GGGCAAGCGT
TGTGAAATCC GCTTCCCCGA TCCCTCTGCC AACCCCTACT TGGCTTTTGC GGCCCTGTTG
ATGGCGGGTA TGGACGGTGT GGAGAACAAG ATTGATCCAG GTCCTTCCAT GGACAAAAAC
CTCTATGATC TGCCCCCCGA GGAGCTCAAG GATATCCCAA CCGTATGTGG TTCCTTGCGT
GAAGCTCTTG AGGAGCTTTC TAAAGATCGT GAGTTCTTGC TCAAGGGTGA CGTTTTCTCC
AACGACCTGA TTGATGCTTA CATCAAGATG AAGATGGATG AGGTCTATGC CGTTGAGCAT
TGCCCCCACC CCATCGAGTT CCAAAACTAC TACAGCGTCT AA
 
Protein sequence
MANKEAVNKV LGMIDANNVR FVDFRFTDFK GKWQHITAPA RMLTEDVFET GLGFDGSSIT 
GWCEINNSDM AYVPDPESAV MDPFSEDATL ILACNIIDPF TGEDYSRDPR SVAKRAEAYL
AYTGIADTAY VGPEAEFFVF DSVRYNVGMN NVSYHIDSEE GAWNTGTEYE DGNTGHRPGI
KGGYFPVPPV DSLQEMRNEM SNLMEEMGLT IEFHHHEVAT AGQCEIDMRF GTMLHTADNI
QKYKYVVHNV AHQYGKTATF MPKPMAGDNG SGMHCHMSIW KDGKPLFAGN QYADLSEMAL
HFIGGIKKHA KALNAFTNPS TNSYKRLIPG FEAPVLLAHS SRNRSASIRI PASNSPAGKR
CEIRFPDPSA NPYLAFAALL MAGMDGVENK IDPGPSMDKN LYDLPPEELK DIPTVCGSLR
EALEELSKDR EFLLKGDVFS NDLIDAYIKM KMDEVYAVEH CPHPIEFQNY YSV