| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0948 |
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| Symbol | |
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| ID | 4482747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1165682 |
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| End bp | 1166245 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639721696 |
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| Product | translation elongation factor P (EF-P) |
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| Protein accession | YP_864872 |
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| Protein GI | 117924255 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00103286 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000108298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTTATCCC ATACAGAAAT GAAGCAAGGT AAACGTGTTC TGATTGATGA TCAGCCGTGG
ATCATCGTGA AGGCCGATTT TGTAAAACCC GGTAAGGGGC AAGCCTTCAC CAAGATCAAG
GTTAAAAACT TGATGGATGG TCGGGTTATC GAGCGCACCT TTAAATCCAG CGACAGTGTG
GCCAAAGCCG ATGTTGTGGA TGTGGAGATG CAGTATCTTT ATAACGATGG CGAGCTCTAC
CACTTTATGA ACCCCGCCAC CTTTGAACAG GTTGCTTTAA GCGAAAAGCA GGTGGAAGAG
TGTAAAAAGT GGCTTAAAGA GAATGAGGTC TACGAAGTGA CGCTGTGGGA AAACCGCGCC
ATTAACGTGG TGCCGCCCTC CTTTATGATC CTGGAAATTA CCGAGTGCGA GCCCGGTGTA
CGGGGTGATA CGGTTACAGG GGCAACCAAG CCGGCGGTGG TGGAGAGTGG TGCTTCCATC
AAGGTCCCCC TGTTTGTAGA GATTGGCGCA CGGGTTAAAG TGGATACCCG CACCGGCGAG
TATATGGAAC GGGCCAAAGG TTAA
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| Protein sequence | MLSHTEMKQG KRVLIDDQPW IIVKADFVKP GKGQAFTKIK VKNLMDGRVI ERTFKSSDSV
AKADVVDVEM QYLYNDGELY HFMNPATFEQ VALSEKQVEE CKKWLKENEV YEVTLWENRA
INVVPPSFMI LEITECEPGV RGDTVTGATK PAVVESGASI KVPLFVEIGA RVKVDTRTGE
YMERAKG
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