Gene Mmc1_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0939 
Symbol 
ID4481591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1156325 
End bp1156993 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID639721687 
Producthypothetical protein 
Protein accessionYP_864863 
Protein GI117924246 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00592056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC AGTATGTTCA GATCCTGCTG CTGTTCTTGC TGCTGCTGGC TATGGCTGTC 
ACTTGGCGCT ATGGGGGAAA TTTACAACCC GCTGCTCTGG AAGGGGGGTT GCGGGGGCTG
GGTTGGGCGA TGCCCCTGCT CTTTATGCTG CTCTATATTT TAGCGACGGT GTTGTTGTTG
CCGAGTGTTT TGGTCACGAT GGCAGGTGGT GCGCTGTTTG GTCCCGTGTG GGGCACCTTG
TATAGCCTAA CCGCAGCCAG TTTGGGGGCG GGCATCGCTT TTTTGCTGAG CCGCTATCTG
TTGCGGGATT GGGTGCAGGC GCGTACACGG GGTATGCTGA AAAGCTTAAT GCAGGGGGTG
GCGGATGAAG GGTGGCGCTT TGTCGCCTTT ACCCGCTTGG TGCCGTTGTT CCCCTTTAGC
CTGCTTAACT ACGCCTTTGG TTTGACGCAG CTGCCCTTTT GGACTTTCAT AGTCGCTTCG
TGGCTGTTTA TGTTGCCGGG CACCGCAGTT TATACCTACC TGGGTTATGT GGGAAAAGAG
GCCGCCGGTG GCGGTGAACA TGTGATGCAC CAAGGGCTGT TGGCGCTGGC TCTGCTGGCT
CTGTTGCTGT TTGTGCCAAG ATGGATCAAT AAATGGCGGG GCCGTAGCCT CGCCAGCCAT
AAAGGATAG
 
Protein sequence
MKKQYVQILL LFLLLLAMAV TWRYGGNLQP AALEGGLRGL GWAMPLLFML LYILATVLLL 
PSVLVTMAGG ALFGPVWGTL YSLTAASLGA GIAFLLSRYL LRDWVQARTR GMLKSLMQGV
ADEGWRFVAF TRLVPLFPFS LLNYAFGLTQ LPFWTFIVAS WLFMLPGTAV YTYLGYVGKE
AAGGGEHVMH QGLLALALLA LLLFVPRWIN KWRGRSLASH KG