Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0939 |
Symbol | |
ID | 4481591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1156325 |
End bp | 1156993 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639721687 |
Product | hypothetical protein |
Protein accession | YP_864863 |
Protein GI | 117924246 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00592056 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAAAC AGTATGTTCA GATCCTGCTG CTGTTCTTGC TGCTGCTGGC TATGGCTGTC ACTTGGCGCT ATGGGGGAAA TTTACAACCC GCTGCTCTGG AAGGGGGGTT GCGGGGGCTG GGTTGGGCGA TGCCCCTGCT CTTTATGCTG CTCTATATTT TAGCGACGGT GTTGTTGTTG CCGAGTGTTT TGGTCACGAT GGCAGGTGGT GCGCTGTTTG GTCCCGTGTG GGGCACCTTG TATAGCCTAA CCGCAGCCAG TTTGGGGGCG GGCATCGCTT TTTTGCTGAG CCGCTATCTG TTGCGGGATT GGGTGCAGGC GCGTACACGG GGTATGCTGA AAAGCTTAAT GCAGGGGGTG GCGGATGAAG GGTGGCGCTT TGTCGCCTTT ACCCGCTTGG TGCCGTTGTT CCCCTTTAGC CTGCTTAACT ACGCCTTTGG TTTGACGCAG CTGCCCTTTT GGACTTTCAT AGTCGCTTCG TGGCTGTTTA TGTTGCCGGG CACCGCAGTT TATACCTACC TGGGTTATGT GGGAAAAGAG GCCGCCGGTG GCGGTGAACA TGTGATGCAC CAAGGGCTGT TGGCGCTGGC TCTGCTGGCT CTGTTGCTGT TTGTGCCAAG ATGGATCAAT AAATGGCGGG GCCGTAGCCT CGCCAGCCAT AAAGGATAG
|
Protein sequence | MKKQYVQILL LFLLLLAMAV TWRYGGNLQP AALEGGLRGL GWAMPLLFML LYILATVLLL PSVLVTMAGG ALFGPVWGTL YSLTAASLGA GIAFLLSRYL LRDWVQARTR GMLKSLMQGV ADEGWRFVAF TRLVPLFPFS LLNYAFGLTQ LPFWTFIVAS WLFMLPGTAV YTYLGYVGKE AAGGGEHVMH QGLLALALLA LLLFVPRWIN KWRGRSLASH KG
|
| |