| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0888 |
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| Symbol | |
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| ID | 4483381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1086579 |
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| End bp | 1087295 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721637 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_864813 |
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| Protein GI | 117924196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.329161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.376556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGG TTTTGAGTTT GCAACCACAC TATGCTGAAA AGCAGGATAA AGAGCAGATC
AATGGCCTGC CTGTGGTGCG GTGGGAGGGT GATGTGGTCT TGGTTAACCA GGACCAAGCG
CTGCCGGCCG CCATTGCCGC CTTGCGGCAA GAGCGGGTGC TGGGATTTGA TACCGAAACC
CGCCCATCGT TTCGTAAGGG TACCAGCTAC GATCCCACCT TGATCCAACT GGCTGGAGAG
AAGGTGGTCT ATCTGTTCCA GATCAACCTG CTTCAAGACC ATCGCCCTTT GGCCGAGCTG
TTGGCCGATA CCAGCATCCA TAAGGTGGGG GTGGGGTTAA GTCAGGATAT TCGCCAATTG
CAGGCGATCT TTAGCTTTAA ACCCGGAGGT TTTGTGGATG TGGGGGAGAC CGCCCGCCAC
AATAATATTG CCACCCGGGG TTTGCGTAGC ATGGCGGCGG CTTTTTTTCA TGTACGCATC
TCCAAACGGG CGCAGTGTTC CAACTGGGCT CAGGAGGCCT TACAACCCTT TCAGATTATT
TATGCTGCAA CCGATGCTTG GATTAGCCGG GAACTGTATG TGGCATTGGC CAATCTCTCT
TTGGTGGATG CCCAGCGTGA TCGGGTGACA TTGCAGCCGG TAAAACCAAA ACGTTTACCA
AGGCGCGGCT TTCGTCGGGC TGAAAATGGT CACGCGCAGG AGCAGAGCTC CTCGTAA
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| Protein sequence | MSSVLSLQPH YAEKQDKEQI NGLPVVRWEG DVVLVNQDQA LPAAIAALRQ ERVLGFDTET
RPSFRKGTSY DPTLIQLAGE KVVYLFQINL LQDHRPLAEL LADTSIHKVG VGLSQDIRQL
QAIFSFKPGG FVDVGETARH NNIATRGLRS MAAAFFHVRI SKRAQCSNWA QEALQPFQII
YAATDAWISR ELYVALANLS LVDAQRDRVT LQPVKPKRLP RRGFRRAENG HAQEQSSS
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