| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0865 |
|---|
| Symbol | |
|---|
| ID | 4480414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1063824 |
|---|
| End bp | 1064003 |
|---|
| Gene Length | 180 bp |
|---|
| Protein Length | 59 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639721613 |
|---|
| Product | 50S ribosomal protein L30P |
|---|
| Protein accession | YP_864790 |
|---|
| Protein GI | 117924173 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.012953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0056399 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA TGATCAAAGT AAAGTTGGTA CGGTCTTTTG TTGGGCGTCC TGATAAGCAG
CGTCGGATTT GCGCTTCTTT GGGTTTGCAC AAGATGAACC GTGTGAAGGA ACTTCCCGAC
AACGCCGCCA TCCGTGGTCA GATCAATAAG GTCTGTCACT TGGTAAGCGT GGTCGATTAA
|
|---|
| Protein sequence | MADMIKVKLV RSFVGRPDKQ RRICASLGLH KMNRVKELPD NAAIRGQINK VCHLVSVVD
|
|---|
| |