Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0853 |
Symbol | |
ID | 4481060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1058895 |
End bp | 1059527 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639721601 |
Product | SSU ribosomal protein S3P |
Protein accession | YP_864778 |
Protein GI | 117924161 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000111374 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000095719 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACAGA AGGTTCATCC GACAGGGTTC CGTTTGGGAA CCACCAAAAC CTGGGACACG CGCTGGTTTG CAGACAGAAA TTATGCAGAT CTGTTGCTTG AGGATATCAA AATTCGAGCT TGGTTAAAAA AACGTCTGGC CCATGCCAGT GTTTCCAAGA TCGTCATTGA GCGTCCTGCC CAGAAAGCGC GCATCAACAT TCACACCGCG CGCCCCGGCA TTATCATTGG TAAGAAGGGC GGCGATATCG AGAAGTTGAA AAACGATATC AAGGCAATCA CCAGTTCGGA AGTGCAGATC AACATTGTTG AGATCCGTAA GCCTGAAGCG GATGCACAGT TGGTTGCCGA GAACGTAGCC CAACAGTTGG AGCGTCGGGT TGCTTTTCGC CGGAGCATGA AGCGGGCTGT TACCTCGGCC ATGCGTTTGG GTGCAGAAGG TATTCGTATT AACTGCGCGG GTCGTCTTGG TGGGGCTGAG ATTGCCCGTA CCGAGTGGTA CCGTGAAGGC CGTGTGCCCC TGCACACCCT GCGTGCAGAT ATCGACTACG GTTTTGCTGA GGCACATACC ACCTACGGCA TCATTGGCGT TAAGGTATGG GTCTACAAAG GCATGCTCAT TGAAAAGAAA TAA
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Protein sequence | MGQKVHPTGF RLGTTKTWDT RWFADRNYAD LLLEDIKIRA WLKKRLAHAS VSKIVIERPA QKARINIHTA RPGIIIGKKG GDIEKLKNDI KAITSSEVQI NIVEIRKPEA DAQLVAENVA QQLERRVAFR RSMKRAVTSA MRLGAEGIRI NCAGRLGGAE IARTEWYREG RVPLHTLRAD IDYGFAEAHT TYGIIGVKVW VYKGMLIEKK
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