Gene Mmc1_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0853 
Symbol 
ID4481060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1058895 
End bp1059527 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID639721601 
ProductSSU ribosomal protein S3P 
Protein accessionYP_864778 
Protein GI117924161 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000111374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000095719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACAGA AGGTTCATCC GACAGGGTTC CGTTTGGGAA CCACCAAAAC CTGGGACACG 
CGCTGGTTTG CAGACAGAAA TTATGCAGAT CTGTTGCTTG AGGATATCAA AATTCGAGCT
TGGTTAAAAA AACGTCTGGC CCATGCCAGT GTTTCCAAGA TCGTCATTGA GCGTCCTGCC
CAGAAAGCGC GCATCAACAT TCACACCGCG CGCCCCGGCA TTATCATTGG TAAGAAGGGC
GGCGATATCG AGAAGTTGAA AAACGATATC AAGGCAATCA CCAGTTCGGA AGTGCAGATC
AACATTGTTG AGATCCGTAA GCCTGAAGCG GATGCACAGT TGGTTGCCGA GAACGTAGCC
CAACAGTTGG AGCGTCGGGT TGCTTTTCGC CGGAGCATGA AGCGGGCTGT TACCTCGGCC
ATGCGTTTGG GTGCAGAAGG TATTCGTATT AACTGCGCGG GTCGTCTTGG TGGGGCTGAG
ATTGCCCGTA CCGAGTGGTA CCGTGAAGGC CGTGTGCCCC TGCACACCCT GCGTGCAGAT
ATCGACTACG GTTTTGCTGA GGCACATACC ACCTACGGCA TCATTGGCGT TAAGGTATGG
GTCTACAAAG GCATGCTCAT TGAAAAGAAA TAA
 
Protein sequence
MGQKVHPTGF RLGTTKTWDT RWFADRNYAD LLLEDIKIRA WLKKRLAHAS VSKIVIERPA 
QKARINIHTA RPGIIIGKKG GDIEKLKNDI KAITSSEVQI NIVEIRKPEA DAQLVAENVA
QQLERRVAFR RSMKRAVTSA MRLGAEGIRI NCAGRLGGAE IARTEWYREG RVPLHTLRAD
IDYGFAEAHT TYGIIGVKVW VYKGMLIEKK