Gene Mmc1_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0852 
Symbol 
ID4481059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1058531 
End bp1058872 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content53% 
IMG OID639721600 
Product50S ribosomal protein L22P 
Protein accessionYP_864777 
Protein GI117924160 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000720413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000829756 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAAG CACGTGCAAC GACAAAGTAC CAGCGCGTCT CTCCTTACAA AGTGCGTCTG 
GTGATCGACC AGATTCGCGG TATGCAAGTT GAGAGCGCTA TGAATCTCCT GGCCTTCTCC
AAGAAGCGCG TAGCAGGGGT GGTTCGTCAG ACTTTAAAGT CTGCGGTTGC CAACGCTGAG
GAGAACTTAG GCCTGGATGT GGATACCCTG GTGGTTTCCC AGGCATATGT AGATCAAGGT
CCGTCCATGA AACGGTTTAA GCCCCGTGCT CGTGGTCGTG CCACTCGTAT TCTGAAGCGG
ACTTCCCACA TCACTGTGGC GGTCTGTCCT CAGGTAGATT AA
 
Protein sequence
MQEARATTKY QRVSPYKVRL VIDQIRGMQV ESAMNLLAFS KKRVAGVVRQ TLKSAVANAE 
ENLGLDVDTL VVSQAYVDQG PSMKRFKPRA RGRATRILKR TSHITVAVCP QVD