Gene Mmc1_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0848 
Symbol 
ID4481055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1056437 
End bp1057060 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID639721596 
Product50S ribosomal protein L4P 
Protein accessionYP_864773 
Protein GI117924156 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.92239e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.22182e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCCAAG TACCCGTTAA AGACGCCAAT AACCAGGAAG TTCGCAGTAC GGAGTTAAAT 
GAATCCGTTT TTGGTCGAGA GATCCGTGCG GACCTTCTGG GTATGGCCGT CAACTATCAA
TTGGCCAAAC GCCGCTTAGG TACCGCTACG GTACTAGGCC GCAGCGATGT CCGTGGTGGT
GGTAAGAAAC CTTACCGTCA AAAAGGCACA GGCAACGCCC GTCAGGGTAC CATTCGTGCG
CCTCAGTTTC GCACCGGTGG TATTGTGTTT GGTCCCCAGC AGCGTGACTA CAGTCACAAA
CTGAATAAAA AGGTTCGCAA GCTCGCTTTG CAGACCGCAT TGTCCGTCAA GGCATCCAGC
GAAGAGATGG TTGTGGTTGA CAAGCTTGAG TTGGCAAGCA TCAAGACCAA GGAGATGAAA
GCGCTGTTAA GCACCTTGGG TGCTGCGCGT TCGACCTTTT TAGTGGTCAA AGAGCTTTCT
AACGAGATCG TCTTGTCGGC ACGCAACATT CCTAACGTGA TGGTTGCGGA TGTGGATGGT
GTGAATGTCT ACGATCTGCT GCGTTACGAA AAGCTGGTTA TCACCGAGGA AGCGGTGCGT
AGCCTCGAGG AGAAGCTGGC ATGA
 
Protein sequence
MIQVPVKDAN NQEVRSTELN ESVFGREIRA DLLGMAVNYQ LAKRRLGTAT VLGRSDVRGG 
GKKPYRQKGT GNARQGTIRA PQFRTGGIVF GPQQRDYSHK LNKKVRKLAL QTALSVKASS
EEMVVVDKLE LASIKTKEMK ALLSTLGAAR STFLVVKELS NEIVLSARNI PNVMVADVDG
VNVYDLLRYE KLVITEEAVR SLEEKLA