Gene Mmc1_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0838 
Symbol 
ID4483418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1040956 
End bp1041474 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID639721586 
Product50S ribosomal protein L10P 
Protein accessionYP_864763 
Protein GI117924146 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0707377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0995834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAAG CAGATAAGAG CAAAATTGTT GAAGAGGTTC GGGAACTCCT GAGCAGCTCC 
AGCGTTGCTG TTGTTACGCA CTATCGTGGT CTGACCGTGG CCGAAATGAC AGAACTCCGA
GTTAAGTTGC GCGAAGCTGG TGCAAATGTG CGCGTGGTCA AGAATACCTT GGCTAAGCGT
GCGGTTGCAG GGACCCCATT TGAAGCTCTT GGTGAGTTTC TGGTTGGGCC AACCAGCATT
GCTTTCTCGG CAGATCCTGT TGCTCCGGCT AAGGTGATCT CGGCATTTGC CAAGACTCAC
CCGAAAATTC AGATCGTCGG TGGTGTACTC GACGGTAAAG CAATGGATGC TGAGGGTATT
GAGCGGCTGG CAAAGCTGCC CAGCAAAGAG GAACTCCTGG CAAAAATGCT GGGCTCCCTC
AATGCACCCA TCACCAACTT CGTTGGGGTA CTGGCCGCCG TTCCTGGCAG CTTTGTACGG
GTACTCAACG CTGTGCGTGA ACAGAAAGAA GCCGCGTAA
 
Protein sequence
MKQADKSKIV EEVRELLSSS SVAVVTHYRG LTVAEMTELR VKLREAGANV RVVKNTLAKR 
AVAGTPFEAL GEFLVGPTSI AFSADPVAPA KVISAFAKTH PKIQIVGGVL DGKAMDAEGI
ERLAKLPSKE ELLAKMLGSL NAPITNFVGV LAAVPGSFVR VLNAVREQKE AA