Gene Mmc1_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0821 
Symbol 
ID4480858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1024885 
End bp1025481 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content54% 
IMG OID639721565 
Product50S ribosomal protein L25P 
Protein accessionYP_864746 
Protein GI117924129 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.153368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAT TTGAGACCGT GACGCGTGAA GGGCTCGGCA AGGGGGTGGC CCGTAAGCTG 
CGTCAACAGG GGCGTATCCC TGCTGTGGTT TACGGCGCAG GCAAAGAGAA CATCAGTCTG
GAGATGAACC TGAACGCTTT TCGCGTTGCG ATTGCCGGTC AGGGACCAAC CCTTTTTAAC
ACCGTTCATC AACTGAGTGT GGATGGCAAG GTTGAAAACG TGTTGGTACG TGGCGTACAG
CGTCACCCTG TGACCGATCT GCCTGAGCAT GTGGACTTTC TGCGTTTGGA CCCCACCAAG
ATGATCACCG TGCATGTGCC TGTGCATCTG CGCAACGAAG ATCAGGCTCC TGGGCTCAAG
CGTGGCGGTA TCATCCAGAT CGTGCGTCAT GAGTTGGAGA TTCACTGCTT GTCCGGCAAC
ATCCCCACCG AGATTTTGGT GGATTGTGCC GAGATGGAGA TTGGTAAATC AATCCATATT
GAGGACATCA CTCTGCCCGA GGGGACCAAG GTGTTCACCG ACGTTAACTT CACCGTGGTG
GTTATGGTGG GTGTTAAGGT TGAAGAGACC GATGAAGAGG CTGGAGCAGA GGCATAA
 
Protein sequence
MATFETVTRE GLGKGVARKL RQQGRIPAVV YGAGKENISL EMNLNAFRVA IAGQGPTLFN 
TVHQLSVDGK VENVLVRGVQ RHPVTDLPEH VDFLRLDPTK MITVHVPVHL RNEDQAPGLK
RGGIIQIVRH ELEIHCLSGN IPTEILVDCA EMEIGKSIHI EDITLPEGTK VFTDVNFTVV
VMVGVKVEET DEEAGAEA