Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0775 |
Symbol | |
ID | 4484066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 959080 |
End bp | 959904 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639721519 |
Product | pirin domain-containing protein |
Protein accession | YP_864702 |
Protein GI | 117924085 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000168068 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.408223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAC AACGCCGTAT CGAACGCATC GTGCCAGCCA CAGCAACGGC AGATGGGGAT GGGGTTAAAA TTAAACGCAC CATTGGTTCC CCCTCCCTGC GGGCATTGGA TCCCTTTCTG CTGCTGGATA CGCTGGAGTC GGATCAAGCG AGCGACTATA GCGGGGGTTT TCCTGATCAT CCCCATCGGG GTTTTGAAAC CGTAACCTAC ATGCTTGAGG GCAAAATGCG TCACCGCGAC AGCAGTGGTG GGGCGGGCTT GCTGGAATCC GGCGGGGCGC AATGGATGAC CGCAGGGCGC GGGGTGATCC ACTCAGAAAT GCCAGAGCAG CATGAGGGTC GGCTGCATGG TTTTCAGTTA TGGGTCAATC TACCCGCGCG GCGTAAAATG ATTCCCGCGC GCTATCAGGA TATTCCCTCC TCTGCCATTC CCGAGGTGGA GGTGGAGCAG GGGGGGCTGC TGCGCCTCAT TGCCGGGCGG GTGGCGGGTC AGCAGGGGCC CGTTAGCGGC ATTGATACAG ATCCGCTGTT GGTCGATGTT CGTTTGCAGG GTGGTGCGGT GATACTGCCC ATCCCTATTG GACATTGTGC TTTTGTGCTG GTCTATGGGG GGAGTATGCA GATAGCGGCT CAACGGGTTG ACCAGGATGC CTTGGCGATT CTGGCTGAGG GCGATCATGT CAGGTTGTCG GGTTTAGGGG GGGCTTTGGT GGTGGCGGGC CAACCCCTTG GCGAGCCCAT TGCGCGCCAT GGTCCCTTTG TTATGAATAC GCACCAGGAG ATTCAGCAAG CGGTGCAGGA TTATGAAACG GGTAACTTTC TTTAG
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Protein sequence | MDKQRRIERI VPATATADGD GVKIKRTIGS PSLRALDPFL LLDTLESDQA SDYSGGFPDH PHRGFETVTY MLEGKMRHRD SSGGAGLLES GGAQWMTAGR GVIHSEMPEQ HEGRLHGFQL WVNLPARRKM IPARYQDIPS SAIPEVEVEQ GGLLRLIAGR VAGQQGPVSG IDTDPLLVDV RLQGGAVILP IPIGHCAFVL VYGGSMQIAA QRVDQDALAI LAEGDHVRLS GLGGALVVAG QPLGEPIARH GPFVMNTHQE IQQAVQDYET GNFL
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