Gene Mmc1_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0727 
Symbol 
ID4481370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp873361 
End bp874110 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content54% 
IMG OID639721470 
Producthypothetical protein 
Protein accessionYP_864654 
Protein GI117924037 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.227366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.944442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CTCTTACTGA ACTTACCATC CCATTTTTAT TGGGCATGAT TAGCACCATT 
CACTGTACAG CCATGTGCGG CGGGATTATG GGTGCCATAG CCTTTGGTAT TCCGGGCTGG
CAAGAGATGG GCGTGTGGCG CCGCATGGGT TATCTGTTTG CGGCCAATAT GGGGCGTATT
TTCAGCTACA TTAGCATGGG GCTGATTTTA TCAACGGTTG GGCAGCAGGT GATGGCATTT
GCTCCTGGGG ATTGGGGGCA TCAGGTTATA CGGGGCATGG CTGCGCTGGT ATTGGTTTTT
ATGGGGCTCT ATTTGGCGGG CAAGGCCCAT TGGTTTGCGG TGGTAGAGCG TTTAGGGCGG
CCTTTGTGGA AACGTTTGGA GCCGTCAAGT CGGCGCTTAT TACCCATTCG TCATCCGGGG
ATTGCGCTGT TATTTGGTTT AATTTGGGGT TGGTTGCCGT GTGCCTTGGT CTATGCGGCG
CTTTTTTGGA GCTTAGGTGC GGCGACGGTG TGGGAGGGTG GCTTACGCAT GGCGTTGTTT
GGGCTGGGCA CATTACCGGC CATGTTGGGG ATTGGTTTGG CGGTCAAGCG CATGCAGCGG
GTAAGGATGC GGTGGCAGAC ACTGGCGGGT TGGGCTTTGG TGGTCATTGG GGTGGCGAGT
TACTGGGTTG ATCCCCACGG TTTGTTGATG GTACCGCAGG CATTGCAGGC TGATTTACCA
TGTATTACAG GGCTTTGTGA AGGTAAGTGA
 
Protein sequence
MSLPLTELTI PFLLGMISTI HCTAMCGGIM GAIAFGIPGW QEMGVWRRMG YLFAANMGRI 
FSYISMGLIL STVGQQVMAF APGDWGHQVI RGMAALVLVF MGLYLAGKAH WFAVVERLGR
PLWKRLEPSS RRLLPIRHPG IALLFGLIWG WLPCALVYAA LFWSLGAATV WEGGLRMALF
GLGTLPAMLG IGLAVKRMQR VRMRWQTLAG WALVVIGVAS YWVDPHGLLM VPQALQADLP
CITGLCEGK