Gene Mmc1_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0704 
Symbol 
ID4481277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp840562 
End bp842289 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content57% 
IMG OID639721447 
Productarginyl-tRNA synthetase 
Protein accessionYP_864631 
Protein GI117924014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.281403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGA GTATCGAAGA GTTGATGGAG CACGCCCAAA ACACCCTGCT GGCGGAAGGG 
GTGATTCCTG CCGATGCGAA ACTTGGGGGT ATTAAGGTGG AGCGTCCCAA GGATAAGAGC
CATGGGGATT TTTCCATTAA TACCGCCATG GTGCTGGCAA AACAGGCGCG GATGAAGCCA
CGGGATCTGG CGCAGCGGCT GGTGGATGCC TTGCCCAGTG GGCAGGGTGT GGTGTCGCGC
TGTGAGATCG CTGGACCGGG TTTTATTAAT TTTTTTGTCA CCCCCGAGCG TCTGCGCGGG
GTGGTTGCCG ATGTGTTGCA GCGTGGCGGC AGTTATGGCC AGGGGAACGT CGGTGCCGGG
CAAAAAGTGC TGGTTGAGTT TGTCTCGGCC AACCCCACAG GCCCCATGCA CGTAGGCCAC
GGGCGGGGTG CCGTCACCGG AGATGTTTTG GCACGTATTC TGGAATGTGC CGGGTATGCG
GTGCAGCGCG AGTACTATTT GAACGACGCG GGTGTGCAGG TACAAGTGCT GGGGCGCTCC
GTGATGCTGC GTTATCGGCA GCTGTTTGGG GATGCCGTTG AGGTGGCGGA GGGATGCTAT
CCCGGCGACT ACGTCGTCGA TATTGCCCGC GCACTTAAGG AAAAAGATCA AGATAAATGG
CTTGAGGTAG CCCGGGCTGA GCCCGATGAG TATCCCCGTG AGATGCTTGA GTTTGCCATG
CAACAGGTAC TCACCTGGAT TAAGGCCGAT TTGGCGCGGT TGAATATTCG TTTTGACCAC
TGGTTCTCGG AGTTCAGCCT ACACAGCGAG GGGCGCATTG AGCATGCCCT GGAGGTGTTA
AGCCAAAAGG GGTGCCTCTA CGAAGGGGTA TTGGAACCAC CCAAGGGTAA AAAAAGTGAG
GCGTGGGCGT CGCGTCCGCA GTTGCTGTTT AAGGCCACCG ATTTTGGGGA TGAGGTGGAC
CGGGCGTTGC GTAAGAGCGA CGGCAGCTAC ACCTATTTTG CCGCTGATGT GGCCTATCAC
CTCAATAAAG CGGAGCGCGG CTTTGAGCGG TTGGTCAATA TCTGGGGGGC TGATCATGGG
GGCTATGTGC GCCGGGTGCA GGCTGCGCTG GGTGCCTTGA CCGGTAAACA GAACCTGTTG
GATGTGGTGC TTATTCAGAT GGTAAACCTC ACCCGTGGGG GCGAACCAGT GAAGATGTCC
AAACGGGCAG GCACCTTTGT AACCCTGGAA GAGGTGGTGG AAGCCACCAG TTCGGATGCG
GTGCGTTTTT GGTTTTTAAG CCGGGGCAGT GGTGCCCAGC TGGATTTTGA TCTGGATCTG
GCGGTGGCCA AGAATAACGA TAATCCGGTC TACTATGTTC AATATGCCCA TGCGCGCATC
TGTTCGATTT GGGATAAAGC CCAGCATGAA GGGGTGGCGT TGCAGGCGCA GGGGTGGTCT
GGGGTAGATC TGTCGCCCCT TGGCGAAGGG GCGGAGTGGG ATCTTATCCG TAAGTTGGAT
CTGTTTCCCG ATGTGGTGGA GGGCGCGGCG GTGCATCAAG AGCCCCACCG TATCCCCTAT
TACCTGTTGG ATTTGGCGGC GGCGTTTCAT ACGTTTTACA ACAGCCATCG TATTATGGAT
GTTGATGCGG GCACGCGTGA TGCCCGCCTC GTACTGATTT TAGCGGTTAA GCAGGTCATT
GCCAATGGCT TGGAGCTGCT GGGTGTTCAA CAACCGAGGT CGATGTGA
 
Protein sequence
MRQSIEELME HAQNTLLAEG VIPADAKLGG IKVERPKDKS HGDFSINTAM VLAKQARMKP 
RDLAQRLVDA LPSGQGVVSR CEIAGPGFIN FFVTPERLRG VVADVLQRGG SYGQGNVGAG
QKVLVEFVSA NPTGPMHVGH GRGAVTGDVL ARILECAGYA VQREYYLNDA GVQVQVLGRS
VMLRYRQLFG DAVEVAEGCY PGDYVVDIAR ALKEKDQDKW LEVARAEPDE YPREMLEFAM
QQVLTWIKAD LARLNIRFDH WFSEFSLHSE GRIEHALEVL SQKGCLYEGV LEPPKGKKSE
AWASRPQLLF KATDFGDEVD RALRKSDGSY TYFAADVAYH LNKAERGFER LVNIWGADHG
GYVRRVQAAL GALTGKQNLL DVVLIQMVNL TRGGEPVKMS KRAGTFVTLE EVVEATSSDA
VRFWFLSRGS GAQLDFDLDL AVAKNNDNPV YYVQYAHARI CSIWDKAQHE GVALQAQGWS
GVDLSPLGEG AEWDLIRKLD LFPDVVEGAA VHQEPHRIPY YLLDLAAAFH TFYNSHRIMD
VDAGTRDARL VLILAVKQVI ANGLELLGVQ QPRSM