Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0700 |
Symbol | |
ID | 4481273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 837559 |
End bp | 838407 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639721443 |
Product | hypothetical protein |
Protein accession | YP_864627 |
Protein GI | 117924010 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00453627 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.367447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGGT GGCGCTCAAG GATGGCTCCA CGACCCACAG GGCGGCGGAT GAATCCATGG TATATGACGA AGGGGAAGGG TGGCATGCAT AAGGTTCAAG CGGTTAATAA GAGATTCGTG CAATTGGGGG TGGCGGTTCT ATGTGGCCTG CTAGGGCTGT TGGCGACCCC CCTTGTTCAG GCAGAAGAGG GCCAGCAGGG GGTTATGGAT GAGGCGGCCA TGCTCTCTTC CATCGCGCGG GGTGGGCGGT TGTACGATAG TTGGTACAAG GAGCTGGATC AAAAGCCGCC CCAAGGCGCC CACACGGCTT ACCCCAGCAG CGGCAAGGCC AAGGCTAAAG ATAGCTGGCG CTGTAAGGAG TGCCATGGCT GGGACGGTAT GGGTAAAGAG GGTGCTTATG CCAAGGGTAA ACATTTTACC GGCATCGTGG GTATAACGGC TGCTAAGGGA CGGGATCCAC AGGCCTTGGT TGCGCTGCTG AAAGAGGCCA CTCACGGCTA TGGGGACAAG CTGGATGATG CCTCGCTGCT GGATCTGGCC CATTTCGTCA GCCTGGGTCA GGTTGACATG GACGCCGTCA TTGAGCGTAA AGATAAAACG ATCAAGCAGG CGAACAGGCA ACAGGGGGCT AACTACTACC AGACCCTGTG CGCCCAGTGC CATGGCAAAC AAGGCATTCA AAAGGGCATG GCGCAGATGG GTGATGCCGC CAGTGGGAAT CCTTGGGAAA CCCTGCATAA AACCCGCAAT GGACAACCAG GCGAAGAGAT GCCTGCGTTG CTGGCGCTGG ATCCGCAAAT TATGTTGGAT ATCATCGACT ATATGCAAAC CTTGCCAAAG AAAAAATAG
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Protein sequence | MAWWRSRMAP RPTGRRMNPW YMTKGKGGMH KVQAVNKRFV QLGVAVLCGL LGLLATPLVQ AEEGQQGVMD EAAMLSSIAR GGRLYDSWYK ELDQKPPQGA HTAYPSSGKA KAKDSWRCKE CHGWDGMGKE GAYAKGKHFT GIVGITAAKG RDPQALVALL KEATHGYGDK LDDASLLDLA HFVSLGQVDM DAVIERKDKT IKQANRQQGA NYYQTLCAQC HGKQGIQKGM AQMGDAASGN PWETLHKTRN GQPGEEMPAL LALDPQIMLD IIDYMQTLPK KK
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