Gene Mmc1_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0700 
Symbol 
ID4481273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp837559 
End bp838407 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID639721443 
Producthypothetical protein 
Protein accessionYP_864627 
Protein GI117924010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00453627 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.367447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGT GGCGCTCAAG GATGGCTCCA CGACCCACAG GGCGGCGGAT GAATCCATGG 
TATATGACGA AGGGGAAGGG TGGCATGCAT AAGGTTCAAG CGGTTAATAA GAGATTCGTG
CAATTGGGGG TGGCGGTTCT ATGTGGCCTG CTAGGGCTGT TGGCGACCCC CCTTGTTCAG
GCAGAAGAGG GCCAGCAGGG GGTTATGGAT GAGGCGGCCA TGCTCTCTTC CATCGCGCGG
GGTGGGCGGT TGTACGATAG TTGGTACAAG GAGCTGGATC AAAAGCCGCC CCAAGGCGCC
CACACGGCTT ACCCCAGCAG CGGCAAGGCC AAGGCTAAAG ATAGCTGGCG CTGTAAGGAG
TGCCATGGCT GGGACGGTAT GGGTAAAGAG GGTGCTTATG CCAAGGGTAA ACATTTTACC
GGCATCGTGG GTATAACGGC TGCTAAGGGA CGGGATCCAC AGGCCTTGGT TGCGCTGCTG
AAAGAGGCCA CTCACGGCTA TGGGGACAAG CTGGATGATG CCTCGCTGCT GGATCTGGCC
CATTTCGTCA GCCTGGGTCA GGTTGACATG GACGCCGTCA TTGAGCGTAA AGATAAAACG
ATCAAGCAGG CGAACAGGCA ACAGGGGGCT AACTACTACC AGACCCTGTG CGCCCAGTGC
CATGGCAAAC AAGGCATTCA AAAGGGCATG GCGCAGATGG GTGATGCCGC CAGTGGGAAT
CCTTGGGAAA CCCTGCATAA AACCCGCAAT GGACAACCAG GCGAAGAGAT GCCTGCGTTG
CTGGCGCTGG ATCCGCAAAT TATGTTGGAT ATCATCGACT ATATGCAAAC CTTGCCAAAG
AAAAAATAG
 
Protein sequence
MAWWRSRMAP RPTGRRMNPW YMTKGKGGMH KVQAVNKRFV QLGVAVLCGL LGLLATPLVQ 
AEEGQQGVMD EAAMLSSIAR GGRLYDSWYK ELDQKPPQGA HTAYPSSGKA KAKDSWRCKE
CHGWDGMGKE GAYAKGKHFT GIVGITAAKG RDPQALVALL KEATHGYGDK LDDASLLDLA
HFVSLGQVDM DAVIERKDKT IKQANRQQGA NYYQTLCAQC HGKQGIQKGM AQMGDAASGN
PWETLHKTRN GQPGEEMPAL LALDPQIMLD IIDYMQTLPK KK