| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0668 |
|---|
| Symbol | |
|---|
| ID | 4482529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 800760 |
|---|
| End bp | 801230 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639721411 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_864595 |
|---|
| Protein GI | 117923978 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAT CCAAACCATG GCGCATATTG GTGCTCAACG GCCCCAACCT AAATATGTTG
GGTAAACGTG AGGCATCCCT CTACGGCCAC GAAACGCTGG CCGATGTCGA GGTGCTGTGC
GCCGCAAAAG CCGCACAACT GGGGGCACAA CTGGCCTTTT ACCAATCCAA TTATGAAGGG
GCGTTGGTGG AGCGCATCCA ACAGGCCCGG GAAGATGCCG ATCTGATCGT CATTAATCCC
GCCGCCTATA CCCACACCTC GGTAGCCATC CGTGATGCCC TGTTGGCCGC AGAAAAACCG
GTGGTGGAGA TCCACATTAG CAACATCCAC AAACGGGAAC CCTTCAGACA CCACTCTTAC
GTTAGCGACA TCGCCCTGGG ACAGGTGGTT GGGCTGGGCA TACGTGGTTA TGCATACGCC
ATGGAAGCCG GCATCACCCA CCTTGAGAGT CAGGTAGCAT CTAAGCCATA A
|
|---|
| Protein sequence | MSPSKPWRIL VLNGPNLNML GKREASLYGH ETLADVEVLC AAKAAQLGAQ LAFYQSNYEG
ALVERIQQAR EDADLIVINP AAYTHTSVAI RDALLAAEKP VVEIHISNIH KREPFRHHSY
VSDIALGQVV GLGIRGYAYA MEAGITHLES QVASKP
|
|---|
| |