Gene Mmc1_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0636 
Symbol 
ID4482899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp769585 
End bp771567 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content59% 
IMG OID639721379 
Producthelicase c2 
Protein accessionYP_864563 
Protein GI117923946 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTA TGGACGAAAT CGAGAGTTGG ACCCACGCGC TGTTTGGTCC GCAAAGCGCC 
TTGGCACAGT GTCTGGAGAG CTACGAACCC CGTGCTGCCC AGGTGCGTAT GGCTGAACTG
GTCGCCCGTG CGGCCCACCA ACAGGATCTT TTGATCGTGG AGGCCGGTAC CGGCACGGGC
AAAACCCTGG CCTATATGCT GCCGCTGCTG GCCATGGGCA AAAAGGTGGT GGTCTCCACC
GCCACCAAAG CGCTGCAAGA TCAAATTTTG GAAAAAGATC TGCCCCTGTT GCGGCAGGTG
GTGGGTAGCC GATTTAGCGC CACCCTGCTC AAGGGGCGGG CCAACTACCT CTGTCTGCAC
CGCTTAACCC AGATGCGCGC CAACCGTAGC CTGTTACGCC ATGAGGCGCG GGCGTGGTTG
GAGGCGATTG AGCAGTGGTC CAGCACCACG GTGCAGGGGG ATCGGGATGA GCTCAAGGAG
CTGCCCGAGC GGTTGGATAT CTGGCCTGAA CTCTCCACCA ATGGGGATGA CTGCCTGGGG
CAGGAGTGCC CTGACCTGCA AGCTTGTTAT CTGTTTAAGG CCCGCGCACG GGCCAAAGAG
GCGCAGTTGG TGGTGGTTAA TCATCACCTG TTTTTTGCCG ATTTGGCGGT GCGCGAAGGG
GGCTTTGGGG AGATCCTGCC CGAGTATCAG GTGGTCGTGT TTGATGAGGC CCACCAGATA
CCCGATGTGG TGACCCGGTT TTTTGGTTTA GAGGTGAGTA ATTTTCAAAT GCTGGAGCTG
GCCAGGGATT GCCGCCGTGA GATGGATATG GTGGGCATGG ATGATCTGGA TCTGCTCCAC
CATTTAACGG TGATCGAAGA GCGGGCCGCA CTGTTACGCA GCGCCTTTCC CGTAGAAAAT
GTGCGGGATG CCCTAGCCCC GCACCATTTG CAAGAGGAGC CGGGCCGGGC GCTGGTCATG
GCGGAACAGG CCCTGCATAA ACTGGCGGAG TTGTTAGAGC CCCATCTTGA ACGCAGCGCT
GGTATGGCGA GCTGTGGGCG GCGTCTGGAG AAGCTGTTGA TCGCCTCGGG CTCTATCCGC
ACCCTGGATG ATCCCGCGCG GGTCTACTGG TATGAAACCC GCAACCGAGG GGTGTTTTTG
CAGGCGTCAC CGCTGAATGT GGGCTTGACC ATGCAAGAGA TGCTCTATCC CCGGGTGCAG
TGCGCGGTGT TTACCTCGGC CACCTTGGCC ACCGGGCAGG GTGAGAAGGG TTTTCACTAT
TTTATGCAGC AGTTGGGTTT GGATGCCCAA GTGGCCACCT GTGAGCAACT GCCGCCGGTG
TTTGATTATG GAACCCAGGC GCGGCTCTAT CTGCCCCGGC GCTTGCCGGA GCCTACCGCG
CCGGGTTTTA CCGCCATGTT TATGGAAGAG TTGGTGGATC TGCTGCATGC CAGCCGGGGG
CGGGCACTCT GTCTGTTTAC CAGCTACCGC ATGATGGGGC AGGTGCAACA GCTTTTACCC
AGCCGCATTC CCTACCCGGT CTATGTACAG GGGGAGCGTC CCAAACGGGC GCTGCTGGAG
ATGTTTAAAA ATCATGAGGC CTCGGTTCTG TTGGGCACCA GTACCTTTTG GGAAGGGGTG
GATATCCCCG GTGCGGCCCT CTCCATGGTG GTGATCGATC GGCTGCCCTT TACCCCCCCG
GATGATCCCA TCAGTGCGGC ACGCAACCGG TATTGTGAGA GCGAGGGCGG CAACCCTTTT
ATGCAACTAT CGGTGCCCCA GGCGATTCTT ACCCTAAAGC AGGGGGCGGG GCGGCTGTTG
CGGCGCCGCA GTGATCGGGG GGTGATTGCG GTGCTGGATA CCCGCATCAG TCGGCGTCCC
TATGGCAAAC GCTTTATCAA CGGTCTGCCT CCGGCGACCT GCATTTATGA TTTGCAGGAG
GTACAACACT TTTTTGCCCA AGAGCCTACG GCAAGCCCCC TAATGGACGA GGTGAATCCA
TGA
 
Protein sequence
MVTMDEIESW THALFGPQSA LAQCLESYEP RAAQVRMAEL VARAAHQQDL LIVEAGTGTG 
KTLAYMLPLL AMGKKVVVST ATKALQDQIL EKDLPLLRQV VGSRFSATLL KGRANYLCLH
RLTQMRANRS LLRHEARAWL EAIEQWSSTT VQGDRDELKE LPERLDIWPE LSTNGDDCLG
QECPDLQACY LFKARARAKE AQLVVVNHHL FFADLAVREG GFGEILPEYQ VVVFDEAHQI
PDVVTRFFGL EVSNFQMLEL ARDCRREMDM VGMDDLDLLH HLTVIEERAA LLRSAFPVEN
VRDALAPHHL QEEPGRALVM AEQALHKLAE LLEPHLERSA GMASCGRRLE KLLIASGSIR
TLDDPARVYW YETRNRGVFL QASPLNVGLT MQEMLYPRVQ CAVFTSATLA TGQGEKGFHY
FMQQLGLDAQ VATCEQLPPV FDYGTQARLY LPRRLPEPTA PGFTAMFMEE LVDLLHASRG
RALCLFTSYR MMGQVQQLLP SRIPYPVYVQ GERPKRALLE MFKNHEASVL LGTSTFWEGV
DIPGAALSMV VIDRLPFTPP DDPISAARNR YCESEGGNPF MQLSVPQAIL TLKQGAGRLL
RRRSDRGVIA VLDTRISRRP YGKRFINGLP PATCIYDLQE VQHFFAQEPT ASPLMDEVNP