Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0636 |
Symbol | |
ID | 4482899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 769585 |
End bp | 771567 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639721379 |
Product | helicase c2 |
Protein accession | YP_864563 |
Protein GI | 117923946 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACTA TGGACGAAAT CGAGAGTTGG ACCCACGCGC TGTTTGGTCC GCAAAGCGCC TTGGCACAGT GTCTGGAGAG CTACGAACCC CGTGCTGCCC AGGTGCGTAT GGCTGAACTG GTCGCCCGTG CGGCCCACCA ACAGGATCTT TTGATCGTGG AGGCCGGTAC CGGCACGGGC AAAACCCTGG CCTATATGCT GCCGCTGCTG GCCATGGGCA AAAAGGTGGT GGTCTCCACC GCCACCAAAG CGCTGCAAGA TCAAATTTTG GAAAAAGATC TGCCCCTGTT GCGGCAGGTG GTGGGTAGCC GATTTAGCGC CACCCTGCTC AAGGGGCGGG CCAACTACCT CTGTCTGCAC CGCTTAACCC AGATGCGCGC CAACCGTAGC CTGTTACGCC ATGAGGCGCG GGCGTGGTTG GAGGCGATTG AGCAGTGGTC CAGCACCACG GTGCAGGGGG ATCGGGATGA GCTCAAGGAG CTGCCCGAGC GGTTGGATAT CTGGCCTGAA CTCTCCACCA ATGGGGATGA CTGCCTGGGG CAGGAGTGCC CTGACCTGCA AGCTTGTTAT CTGTTTAAGG CCCGCGCACG GGCCAAAGAG GCGCAGTTGG TGGTGGTTAA TCATCACCTG TTTTTTGCCG ATTTGGCGGT GCGCGAAGGG GGCTTTGGGG AGATCCTGCC CGAGTATCAG GTGGTCGTGT TTGATGAGGC CCACCAGATA CCCGATGTGG TGACCCGGTT TTTTGGTTTA GAGGTGAGTA ATTTTCAAAT GCTGGAGCTG GCCAGGGATT GCCGCCGTGA GATGGATATG GTGGGCATGG ATGATCTGGA TCTGCTCCAC CATTTAACGG TGATCGAAGA GCGGGCCGCA CTGTTACGCA GCGCCTTTCC CGTAGAAAAT GTGCGGGATG CCCTAGCCCC GCACCATTTG CAAGAGGAGC CGGGCCGGGC GCTGGTCATG GCGGAACAGG CCCTGCATAA ACTGGCGGAG TTGTTAGAGC CCCATCTTGA ACGCAGCGCT GGTATGGCGA GCTGTGGGCG GCGTCTGGAG AAGCTGTTGA TCGCCTCGGG CTCTATCCGC ACCCTGGATG ATCCCGCGCG GGTCTACTGG TATGAAACCC GCAACCGAGG GGTGTTTTTG CAGGCGTCAC CGCTGAATGT GGGCTTGACC ATGCAAGAGA TGCTCTATCC CCGGGTGCAG TGCGCGGTGT TTACCTCGGC CACCTTGGCC ACCGGGCAGG GTGAGAAGGG TTTTCACTAT TTTATGCAGC AGTTGGGTTT GGATGCCCAA GTGGCCACCT GTGAGCAACT GCCGCCGGTG TTTGATTATG GAACCCAGGC GCGGCTCTAT CTGCCCCGGC GCTTGCCGGA GCCTACCGCG CCGGGTTTTA CCGCCATGTT TATGGAAGAG TTGGTGGATC TGCTGCATGC CAGCCGGGGG CGGGCACTCT GTCTGTTTAC CAGCTACCGC ATGATGGGGC AGGTGCAACA GCTTTTACCC AGCCGCATTC CCTACCCGGT CTATGTACAG GGGGAGCGTC CCAAACGGGC GCTGCTGGAG ATGTTTAAAA ATCATGAGGC CTCGGTTCTG TTGGGCACCA GTACCTTTTG GGAAGGGGTG GATATCCCCG GTGCGGCCCT CTCCATGGTG GTGATCGATC GGCTGCCCTT TACCCCCCCG GATGATCCCA TCAGTGCGGC ACGCAACCGG TATTGTGAGA GCGAGGGCGG CAACCCTTTT ATGCAACTAT CGGTGCCCCA GGCGATTCTT ACCCTAAAGC AGGGGGCGGG GCGGCTGTTG CGGCGCCGCA GTGATCGGGG GGTGATTGCG GTGCTGGATA CCCGCATCAG TCGGCGTCCC TATGGCAAAC GCTTTATCAA CGGTCTGCCT CCGGCGACCT GCATTTATGA TTTGCAGGAG GTACAACACT TTTTTGCCCA AGAGCCTACG GCAAGCCCCC TAATGGACGA GGTGAATCCA TGA
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Protein sequence | MVTMDEIESW THALFGPQSA LAQCLESYEP RAAQVRMAEL VARAAHQQDL LIVEAGTGTG KTLAYMLPLL AMGKKVVVST ATKALQDQIL EKDLPLLRQV VGSRFSATLL KGRANYLCLH RLTQMRANRS LLRHEARAWL EAIEQWSSTT VQGDRDELKE LPERLDIWPE LSTNGDDCLG QECPDLQACY LFKARARAKE AQLVVVNHHL FFADLAVREG GFGEILPEYQ VVVFDEAHQI PDVVTRFFGL EVSNFQMLEL ARDCRREMDM VGMDDLDLLH HLTVIEERAA LLRSAFPVEN VRDALAPHHL QEEPGRALVM AEQALHKLAE LLEPHLERSA GMASCGRRLE KLLIASGSIR TLDDPARVYW YETRNRGVFL QASPLNVGLT MQEMLYPRVQ CAVFTSATLA TGQGEKGFHY FMQQLGLDAQ VATCEQLPPV FDYGTQARLY LPRRLPEPTA PGFTAMFMEE LVDLLHASRG RALCLFTSYR MMGQVQQLLP SRIPYPVYVQ GERPKRALLE MFKNHEASVL LGTSTFWEGV DIPGAALSMV VIDRLPFTPP DDPISAARNR YCESEGGNPF MQLSVPQAIL TLKQGAGRLL RRRSDRGVIA VLDTRISRRP YGKRFINGLP PATCIYDLQE VQHFFAQEPT ASPLMDEVNP
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