Gene Mmc1_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0562 
Symbol 
ID4481396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp681489 
End bp682490 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID639721309 
ProductN-acetylneuraminate synthase 
Protein accessionYP_864493 
Protein GI117923876 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03569] N-acetylneuraminate synthase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAT TGGTGATTGC AGAGGCTGGG GTGAACCACA ATGGCAGCCT CTCTATGGCC 
TTGGAGTTGG TGGATGCCGC CGCCCACTGC GGGGCGGATG TGGTAAAGTT TCAGAGCTTT
GACCCCCAAC AGATCGCCAG CCGCCATGCG GGCAAGGCGG CCTATCAAAA ACGCACCACC
GACGCTACCG AGAGCCAACA GGCGATGTTG GCCCGGCTGG CTTTGTCGGT AGAAGATCAC
CACCAATTGC TGCAACGCTG CCAGCAGCGG GGTATTGGGT TTCTCTCCAG CCCGTTTGAT
CTGCCGAGTC TGGCGCTATT GGTGGGGCTG GGCTGTCGCC CCTTTAAGAT TCCCTCAGGG
GAGATCACCA ACCTGCCCTT GCTACGGGGC ATTGGTGCCA CGGGGGAAGC GGTGCTGCTC
TCTACCGGCA TGGCCACCCT GGGCGAGGTG GAGGCGGCCA TCAACGTGCT GGTCATGGCA
GGCACACCAC GGGCGCAGAT CACCCTATTA CACTGCACCA CCGAATATCC GGCACCGTTG
CAGGAGGTCA ATCTACGGGC CATGCTCAGC ATGGGCCAAA GCTTTGCCCT GCCCTACGGC
TACAGCGACC ATACCGAGGG CATTGCCATC GCCATCGCAG CGGCGGCCTT GGGGGCGACG
GTCATAGAGA AACATTTTAC CCTGGATCGT CAGCTGCCAG GACCCGACCA CAAAGCCTCG
TTGGAACCCG CTGCTTTGGG GGAGATGGTG CAGGGCATAC GGCAGGTTGA GCAGGCCATG
GGGGATGGCA TCAAACGCCC CACCCCAACG GAGCTGGCCA ACCGCCCCAT CGCCCGCAAA
AGCATTGTTG CCCGCTGCGC CATCCGGGCG GGGGAGCCCC TAACTGCGGA GAACCTCACC
ACCAAACGCC CTGGCGATGG CCTTAGCCCC ATGTATTGGG ATGAGCTGGT GGGACGCCCT
GCCCAGCGCG ACTATGCCGA AGATGATCCC ATTGAACGCT AA
 
Protein sequence
MATLVIAEAG VNHNGSLSMA LELVDAAAHC GADVVKFQSF DPQQIASRHA GKAAYQKRTT 
DATESQQAML ARLALSVEDH HQLLQRCQQR GIGFLSSPFD LPSLALLVGL GCRPFKIPSG
EITNLPLLRG IGATGEAVLL STGMATLGEV EAAINVLVMA GTPRAQITLL HCTTEYPAPL
QEVNLRAMLS MGQSFALPYG YSDHTEGIAI AIAAAALGAT VIEKHFTLDR QLPGPDHKAS
LEPAALGEMV QGIRQVEQAM GDGIKRPTPT ELANRPIARK SIVARCAIRA GEPLTAENLT
TKRPGDGLSP MYWDELVGRP AQRDYAEDDP IER