Gene Mmc1_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0559 
Symbol 
ID4481393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp678329 
End bp679018 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content57% 
IMG OID639721306 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_864490 
Protein GI117923873 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAG GCAAACGGGT ATTGGCGCTT ATTCCAGCGC GGGGGGGCTC CAAGGGCATA 
CCGGGTAAAA ACCTGGTGGA GCTGGGGGGC AAGCCCTTAT TGGCGTGGAG CATTGAGACC
GCTTTGGCGT GCAGCGGCAT AGATCGGGTG GTGTTGAGCT CTGATGATGC GTCGATTATG
GCGTGTGGCC GTGCCTATGG CTGTGATGTG CCGTTTGTGC GTCCGGCGGC GTTAAGCACC
GACGCCGCAC CAGCAGCCGA TGCCATTATG CATGCCTTGG AGAGTCTGGA AGAGGCTTAT
GATTATTTGG TAATTTTACA GCCCACCTCC CCCTTTCGCC GGGTTGAGGA TGTGGAGGCT
TGCCTTGCAT TAAGCATCAA ACAAGGTGCC CCGGTGGTAT CGGTCATGGA GCCTCGGCAT
CCCCCACAAT GGATGTTTTC GCTGGGGGAA ACGGGGGAGA TGCAACCCTT ATTAAGCGGC
GAGATCCCCT ACCAGCGGCA AAAGGTGCGC CCCTATTATG CTTTAAATGG TGCTGTATAT
GTGGCCGAGG TAGCCTATTT TCGGGAACAT CGGAGTTTTT TGGGGGAGCG CACCTTGGCG
CATCTCATGC CAGCGGCTTT TTCGGTGGAT ATTGATACGC CGGATGATCT CATCTGTGCG
CGGGCACGGC TGCACGCGCT GCCCGGTTAG
 
Protein sequence
MVAGKRVLAL IPARGGSKGI PGKNLVELGG KPLLAWSIET ALACSGIDRV VLSSDDASIM 
ACGRAYGCDV PFVRPAALST DAAPAADAIM HALESLEEAY DYLVILQPTS PFRRVEDVEA
CLALSIKQGA PVVSVMEPRH PPQWMFSLGE TGEMQPLLSG EIPYQRQKVR PYYALNGAVY
VAEVAYFREH RSFLGERTLA HLMPAAFSVD IDTPDDLICA RARLHALPG