| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0531 |
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| Symbol | |
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| ID | 4480696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 635422 |
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| End bp | 636531 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721278 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_864462 |
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| Protein GI | 117923845 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.887659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA AATCGACAGA CAAGCCCGCA CCATTGCCTC GGCGTCAATT TATTAAGGGT
ACGTTGGCGG CTACCGCCAC GGCAGCGGTG GCGGCTCCCG CGATCGTGAG CAGCAAGGCC
CGCACCCGTT GGCAGATGGT CACGGCGTGG CCGCGTAATT TTCCCGGTTT AGGCACGGGG
GCCAATGCGT TGGCAAACCT GATTACCGAA ATGAGCGGTG GACGGCTAGA GGTGCAGGTT
TTTGGGGCAG GGGAGCTGGT GGGGGCCTTT GAGATCTTTG ATGTGGTCTC ACGGGGTACG
GCGGATATGG GGCATGGTGC CTCCTATTAT TGGAAGGGCA AACATCCCGC CACCCAATTT
TTTTCGGCGG TGCCGTTTGG TTTGACCGCG CAGGAGATGA ACGCTTGGAT CTATCAGGGG
GGCGGTTATG AATTGTGGCA GAAACTCTAT GCTCAGTTTG ATCTGATCCC CGGTGCGGCG
GGCAATACCG GTACCCAGAT GGGGGGGTGG TTTAACAAAG AGATTCATAA GGTCGAGGAT
CTGCAAGGTC TGAAGATGCG CATGCCCGGT TTAGGGGGGG AGGTGCTCAA GCGGGCCGGG
GGTACGCCGG TGAACATTCC CGGTGGGGAG ATTTTTGCGG CGCTACAAGC GGGTACCATT
GATGCGACAG AGTGGGTGGG GCCGTATAAT GATCTGGCCT TTGGTCTCTA TAAGGCGGCC
AAATATTATT ACTATCCGGG CTGGCATGAA CCGGGTACCA CCCTTGAGTG TTTTGTCAGT
CGCAAATCGT TCGAGAAGTT GCCGAAAGAT CTGCAAAGCA TCGTGCTTAA CGCCATTCGG
GTTGCAAACC TCAATATGTT GTCGGATTTT ACGGCGCGTA ACAATGCCGC CTTGGAGATT
TTGGTCAACA AACACAAAGT CTCGCTGCGG CGTTATCCCG ATGAAGTGTT GGCCAAACTC
AAAACGCTCT CCGATGAAGT GGTGGCGGAA ATCGCCCTTG AAGATCCCCT CTCTAAAGAG
GTGTATGACT CCTTTCGCCG TTTTAGGGAT CAAGCGGTCG CCTGGAATCG GGTCTCGGAA
CAGGCCTATG TAAATGCCCG TCAAGTCTAA
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| Protein sequence | MQQKSTDKPA PLPRRQFIKG TLAATATAAV AAPAIVSSKA RTRWQMVTAW PRNFPGLGTG
ANALANLITE MSGGRLEVQV FGAGELVGAF EIFDVVSRGT ADMGHGASYY WKGKHPATQF
FSAVPFGLTA QEMNAWIYQG GGYELWQKLY AQFDLIPGAA GNTGTQMGGW FNKEIHKVED
LQGLKMRMPG LGGEVLKRAG GTPVNIPGGE IFAALQAGTI DATEWVGPYN DLAFGLYKAA
KYYYYPGWHE PGTTLECFVS RKSFEKLPKD LQSIVLNAIR VANLNMLSDF TARNNAALEI
LVNKHKVSLR RYPDEVLAKL KTLSDEVVAE IALEDPLSKE VYDSFRRFRD QAVAWNRVSE
QAYVNARQV
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