| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0503 |
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| Symbol | |
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| ID | 4480761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 607380 |
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| End bp | 608768 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639721250 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_864434 |
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| Protein GI | 117923817 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAT CCCTCTCCGA CCGCCTTGAA ATCACCTTTA AAAAACTCAA AGGCCAAGGA
AAACTCTCGG AACAAAATAT TAAAGATGCC CTGCGCGAAG TGCGCATCGC CTTGCTAGAG
GCCGACGTAA ACCTAAACGT CACCAAAGCG TTTATCCGTC GGGTTCAAGA AAAAGCCATT
GGCGTTGAGG TGCTGAAATC CCTCACCCCA GGGCAACAGG TCATCAAAAT CGTCCATGAC
GAACTGGTCG CCGTCATGGG CGCAGCCAAC GAAAGCCTAA ACCTCGCTAA CCAACCCCCG
GTGGTGGTGA TGATGGCGGG TCTGCAAGGC TCTGGTAAAA CCACCAGCAC CGCCAAGCTC
GCCAAACGCC TCATTGATAA AGAGCGGAAA AAATGCCTGC TCGCCTCCTT GGATGTCTAC
CGTCCTGCGG CTATGAAACA GCTGCAAACC GTCGGTGAAC AGGTTGGTGC GACGGTATTG
CCAACGGAAC CGACAGAAAA CCCGCGAGAG ATCGCCAAAC GTGCGCTGGA GGAAGCCAAA
AAGGGCGGCT TTGATGTGCT GTTCCTGGAT ACCGCTGGAC GCCTGCACAT TGATGAAGCC
CTGATGAGCG AGTTGGCCGA TGTGGCCGCT CTGGTCAACC CTCACGAAAT CCTGTTTGTT
GCCGATGCCA TGACCGGCCA AGATGCCGTC AGCGTGGCTA AAAATTTCGA TGACCGACTG
AATATCACCG GCGTGCTGCT CTCTAAAACC GATGGTGACG CGCGGGGCGG TGCCGCCCTG
TCCATCCGTG AAGTGACGGG CAAACCCATT AAATTTTTGG GTACTGGGGA AAAGCTGGAT
GGCCTAGAGC CCTTCCACCC CGACCGCGTA GCCTCCCGCA TTTTGGGTAT GGGCGATGTG
GTCTCCCTGG TGGAAACCGC CATGGAAAAG GTGGATCTGG AAGAGACCTT TAAACTTCAG
GAAAAACTGG CCAATAAAAA GGGCTTTACC TTGGAGGATT TTCTCACCCA AATGCAACAG
GTGCAGAAAA TGGGCTCCAT CAGTGATCTG GTGGGCATGA TCCCCGGTGC CAAACAGGCC
ATGAAGGGTA AAGAGCTGGA TGTGGACGAT AAACAGATTA AACGCCTCGA AGCGATTATT
CTCTCCATGA CCAAAAAAGA GCGGCAAAAA CACGCGCTCA TTAATGCATC CCGCAAACGC
CGCATTGCGG CGGGCTCTGG TACCTCGGTA CAAGAGGTCA ATAAGCTGCT CAAACAGTTT
GTGCAGACCC AGACCATGAT GAAAAAATTG GGCGGTATGG GTGGCCTGGG TAAAATGATG
AAGGGCATGA AAGGCTTGCC CAAAATTCCT GGTCTTGGCG GTGGCGGTTT TCCTAAGCTA
CCCTTTTAA
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| Protein sequence | MFESLSDRLE ITFKKLKGQG KLSEQNIKDA LREVRIALLE ADVNLNVTKA FIRRVQEKAI
GVEVLKSLTP GQQVIKIVHD ELVAVMGAAN ESLNLANQPP VVVMMAGLQG SGKTTSTAKL
AKRLIDKERK KCLLASLDVY RPAAMKQLQT VGEQVGATVL PTEPTENPRE IAKRALEEAK
KGGFDVLFLD TAGRLHIDEA LMSELADVAA LVNPHEILFV ADAMTGQDAV SVAKNFDDRL
NITGVLLSKT DGDARGGAAL SIREVTGKPI KFLGTGEKLD GLEPFHPDRV ASRILGMGDV
VSLVETAMEK VDLEETFKLQ EKLANKKGFT LEDFLTQMQQ VQKMGSISDL VGMIPGAKQA
MKGKELDVDD KQIKRLEAII LSMTKKERQK HALINASRKR RIAAGSGTSV QEVNKLLKQF
VQTQTMMKKL GGMGGLGKMM KGMKGLPKIP GLGGGGFPKL PF
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