Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0487 |
Symbol | |
ID | 4482399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 586469 |
End bp | 587392 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721234 |
Product | inner-membrane translocator |
Protein accession | YP_864418 |
Protein GI | 117923801 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCT ACGTTATCGG ACAACAACTG GTCAATGGAG TGGTGCTCGG CTCCATCTAT GGCCTTATCG CGGTGGGCTA TACCATGGTC TACGGCATCA TTGGTATGAT CAATTTTGCC CATGGCGAAA TTTATATGAT CTCTGCCTAC CTGACCGCCA TTACCTTGGC CGTGCTTACA ACATGGGGCG TCGATTCGGT CTTTCTGGCC CTCATCCTGA CCCTTATCAG CAGCATCGCT TTTACCGCCC TGTATGGCTG GACAGTGGAG CGTATCGCCT ATCGACCTCT GCGCCGCTCC ACCCGTTTGG CCCCCTTGAT TTCTGCCATT GGCATGTCAT TGGTTTTGCA AAACTATGTA CGTTTGGCCC AAGGCAGTCG TAACCAAGGG GTGCCCAGTT TGATGGAAGG TAATCTGCGT CTGGTGGGGG AGAACCCCGA GCAGTTTGTG CAAGTAACCT ATGTGCAGTT GGTGATCGTG CTCACCGCTT TGATCAGTAT GGGTATTTTA AGCTGGACGA TCCAAAAAAC CGCGCTGGGG CGTGCGTGCC GGGCTACGCA ACAAGATCGT GTTATGGCAG AACTGCTGGG GGTGAATACG GATCGTATTA TCTCTGTGGT GTTTGTGCTG GGGGCATCCA TGGCTGCTGT GGCGGGGGTG CTGGTTACGG TCAACTATGG CTCGTTTGAT TTTCATGTGG GGTTTGTCAC CGGCATTAAA GCCTTTACGG CGGCGGTGCT GGGGGGCATC GGCTCCCTAC CTGGGGCGAT GTTGGGGGGG TTGATTTTGG GGCTGTCCGA GTCGTTTTTT GCGGGGTTTG TCAACAGTGA CTATAAGGAT GTCTTTGCGT TTTCTATCCT GGTATTGGTG TTGATTTTTA AACCCAGTGG GTTGTTGGGT CGCCCTGCTG TCGAAAAGGT ATAA
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Protein sequence | MNSYVIGQQL VNGVVLGSIY GLIAVGYTMV YGIIGMINFA HGEIYMISAY LTAITLAVLT TWGVDSVFLA LILTLISSIA FTALYGWTVE RIAYRPLRRS TRLAPLISAI GMSLVLQNYV RLAQGSRNQG VPSLMEGNLR LVGENPEQFV QVTYVQLVIV LTALISMGIL SWTIQKTALG RACRATQQDR VMAELLGVNT DRIISVVFVL GASMAAVAGV LVTVNYGSFD FHVGFVTGIK AFTAAVLGGI GSLPGAMLGG LILGLSESFF AGFVNSDYKD VFAFSILVLV LIFKPSGLLG RPAVEKV
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