| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0467 |
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| Symbol | |
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| ID | 4481249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 566344 |
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| End bp | 567696 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639721214 |
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| Product | TolB domain-containing protein |
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| Protein accession | YP_864398 |
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| Protein GI | 117923781 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.84052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.495381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA TTTTTCCCCC AATCCATCGC CTCGGCATCC GGCTGTTGGC CTCTCTCCTG
TTTCTCTTGC TGAGTGGTTC AGTGCATGCC CAGGGCATGA TGATTGAGGT ACAAAAACAG
GGGCTGGAAC CCATGCCCAT CGCCATCCCC AGCTTCGCTT CGGTGGGGCT CAATGGTCAT
GTGGAGGTTG GGGACCGTTT TAGTCATCAA CTCACCGGCT TGGTTATCTC CGATTTAAGC
GGCAGCGGCC TGTTTCGGCC ACTGGAACAA CGGGGTTTTT TGCAACCGTC GGATAAATTG
TGGCAGCAAG GCCCCGATTT TCGCAAATGG CGCTTGGTAG GGGCCGATGC CGTGGTACAG
GGTGCCATCA CCTATCGGGG CAGCCGTATT CAGGTTGATT TTTTCTTGCA TGACATCTCC
CGTGGTACCT TGATTGGCAA AGGCTGGCGT TTTACCACCA AGCCTGAGAA TTGGCGCCAT
GTGGCCCACC GCGTGGCCGA TGAGATCTAC ACCCGCTTGA CCGGTGAGCG TGCCTATTTT
ACCTCGCGCA TCGCCTTTGT TGCCAAACGG GATAAACAGA GCTTTCTCTC CATGATGGAT
GCCGATGGTG CCAACCGCAT GGATCTCAAG GTCAAGGGTC GCAACGACCT GGTGCTCACC
CCGCGCTTTT CTCCCAATGG TGAGCAGCTG CTCTATATCT CGTACGAGAG CAGCGAACCC
CGCATCTATC TTTGGGATCT CTACACCGGC AAACGGGTTA AACGCTCCAA CTATCCTGGT
TTAAACTCCA CCCCGGCGTG GTCGCCCGAC GGCAACCGCA TGGCGTTGAC CCTGAGTAAA
GACGGTAACT CAGAGATCTA TGTGATTGAC ATGCGCAACC AGAGCCTGCA ACGCCTGACC
TATAATGCAG CCATTGATAC CTCCCCCTCT TGGTCGCCGG ATGGCCGGCG CATGGTCTTT
ACCTCGGACC GTGCCGGGAC CCCCCAGCTC TATATCATGG ATGCCGACGG CAGCGATGTG
CGCCGTCTTA CCCAACGTGG TCAAAGCAGC ACCGCACCAA GCTGGTCTAA CCGGGGGGAT
AAGATTGCCT TTGTGCGGGG AGGGGGTGGC AAGTTTCGCA TTGCCGTGAT CGACCCAACG
GGACGGGATG AACAGCTGCT TACCGACTCC TGGATGGATG AATCCCCCAC GTGGTCGCCC
AATGGGCGGG TGATTCTCTT TTCCCGTCAG CAACAGGGTA GCAGCCGCAC GCGACTCTTT
ACCATCGACA TCACCGGCTT TAATGAGCAG GAGGTACCGT TGGAACAAGA TATCAGCGCG
TCGGATCCCT CCTGGTCGCC GGTGATCAAA TAA
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| Protein sequence | MNMIFPPIHR LGIRLLASLL FLLLSGSVHA QGMMIEVQKQ GLEPMPIAIP SFASVGLNGH
VEVGDRFSHQ LTGLVISDLS GSGLFRPLEQ RGFLQPSDKL WQQGPDFRKW RLVGADAVVQ
GAITYRGSRI QVDFFLHDIS RGTLIGKGWR FTTKPENWRH VAHRVADEIY TRLTGERAYF
TSRIAFVAKR DKQSFLSMMD ADGANRMDLK VKGRNDLVLT PRFSPNGEQL LYISYESSEP
RIYLWDLYTG KRVKRSNYPG LNSTPAWSPD GNRMALTLSK DGNSEIYVID MRNQSLQRLT
YNAAIDTSPS WSPDGRRMVF TSDRAGTPQL YIMDADGSDV RRLTQRGQSS TAPSWSNRGD
KIAFVRGGGG KFRIAVIDPT GRDEQLLTDS WMDESPTWSP NGRVILFSRQ QQGSSRTRLF
TIDITGFNEQ EVPLEQDISA SDPSWSPVIK
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