| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0465 |
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| Symbol | |
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| ID | 4481247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 564311 |
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| End bp | 565444 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721212 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_864396 |
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| Protein GI | 117923779 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.992619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCC AGTCTCTATT GGCAACCGCT CGACGCTTGG CGTGGGTGAC AGCCCTCAGT
GTGACGCTTT CGGCCTGTGT AACCAATCCA GATTTTAGCA GCGCCCCCAC CACCACCAAG
GGTGCCAAAA GTCCCGTGGA ACTGGCCATG GATGAGGTTC ACTCCAAGCT GGATGCCCTT
ACCGCTGCCG ATGCTTCGCG GCGCACGGCG TTGACCGATC AGAACAAACG TTTGGAGCTG
TTGCAGCAGG AGATCACTTC TCTGCGCGGA GAGCTGGACC AAACCCGTCA CGGTGCACAG
CAGCTGGGGC AGCATGTGGC TGAATTGCGC AACTATATTG CGCGGGCCTA CGGTATGCCC
ATGCAATCCT CCCCCAGCGT CGATTTTGCC CAACCCCCAG CCGAACAAGG TGCTCAGGTC
GGCTTTAACC AACCCGGTAT GGGTCTGGTG GGGATGCAGC AAAATCAAGA GAGCGCGCGC
CAAGCCCAAG CCACGATGGA ACAACCGGGC ATGAACCCCA ATGCCGCTAT GCAGCCCGGC
ATGGAGCCCA TGGCCCAATC GAACCTGGGT AACGGCACGC TGCAACCTCA AGGAATGGGG
GGGGCAGTCA TGCAACCACC CCCCCTGTTG CCACAACAGC CCGGCATGGG ACAGCCAACC
ATGGGCATGC TGGGCCAGAA CACGCAGCAA GCCTTGACGG CGGCCCAGCC ACCCGCGCCC
AAGGTATTAC CCCAAGCCAC CAATGCCAAG GAGGCCTACG ATCAAGCCAA GCTCTATGTC
ACCAGTGGTC AATATGACCG GGCCCAAGAG CTGTTTGATG GCTTTTTAAA GCAGTATGGC
AGCGATCCTT TGGCGGATAA TGCTCAATAT TGGCTGGGGG AGATGCACTA TGTGCAACGT
AATTTCCGCA GTGCCTTGGT GGAATTTAAC AATGTATTGG TTAAATGGCC CAACAGCGGC
AAGGTACCCG ACAGTCTCTT AAAGATTGGT TTCAGCTTTT ATGAGCTGGA GGATTATGAA
AATGCTCGCC GTGCCCTTGA GCAGTTGGTG CAGAACTATC CTAATGCCAA TGCGGTACCC
CTGGCCATGC AGCGCTTAAA GCGCATTGAG CAGGTCAAGG CGAACATTCA CTAA
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| Protein sequence | MQTQSLLATA RRLAWVTALS VTLSACVTNP DFSSAPTTTK GAKSPVELAM DEVHSKLDAL
TAADASRRTA LTDQNKRLEL LQQEITSLRG ELDQTRHGAQ QLGQHVAELR NYIARAYGMP
MQSSPSVDFA QPPAEQGAQV GFNQPGMGLV GMQQNQESAR QAQATMEQPG MNPNAAMQPG
MEPMAQSNLG NGTLQPQGMG GAVMQPPPLL PQQPGMGQPT MGMLGQNTQQ ALTAAQPPAP
KVLPQATNAK EAYDQAKLYV TSGQYDRAQE LFDGFLKQYG SDPLADNAQY WLGEMHYVQR
NFRSALVEFN NVLVKWPNSG KVPDSLLKIG FSFYELEDYE NARRALEQLV QNYPNANAVP
LAMQRLKRIE QVKANIH
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