Gene Mmc1_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0464 
Symbol 
ID4481246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp563676 
End bp564203 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID639721211 
ProductHPP family protein+B94 
Protein accessionYP_864395 
Protein GI117923778 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.938531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTT ATCTTAAACG GTTGATCGCC CCTGCGACAC CAAACGCAAA AGTTGCCGAC 
ATGTTTTGGT CTTGGCTCGG TAGCTTTTTG GGTATTGGCT TGGTCGCTTG GCTCCATGAC
CATCTGCTTA CCCAACAAGA TTTGGTTTTT ATCATCGGCT CCTTTGGGGC TTCCGCAGTG
TTGATCTACG GCGCCATCAG CTCCCCCTTG GCGCAGCCCC GCAACCTGCT GGGTGGTCAC
TTGATCTCGG CCTTGGTGGG GGTTGCTGTG TTCCAAACGA TGGGTAGCCT GCCTTGGTTG
GCGGCGGCGT TGGCGGTCTC TTTGGCTATT GTCGCCATGC AGTTTACCCG CACCCTGCAC
CCACCCGGTG GGGCCACCGC ACTGATTGCG GTTATCGGCT CGCAACGCAT TCACGACTTG
GGTTACTGGT ATGCGCTGCT GCCTGCGCTG AGTGGGGCGA TTTGCCTGCT GGTGGTGGCG
CTGCTGGTCA ACCATCTGGC ACCGGGTCGA AACTATCCCA CCACCTGA
 
Protein sequence
MTGYLKRLIA PATPNAKVAD MFWSWLGSFL GIGLVAWLHD HLLTQQDLVF IIGSFGASAV 
LIYGAISSPL AQPRNLLGGH LISALVGVAV FQTMGSLPWL AAALAVSLAI VAMQFTRTLH
PPGGATALIA VIGSQRIHDL GYWYALLPAL SGAICLLVVA LLVNHLAPGR NYPTT