| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0463 |
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| Symbol | |
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| ID | 4481245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 559550 |
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| End bp | 563494 |
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| Gene Length | 3945 bp |
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| Protein Length | 1314 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721210 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_864394 |
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| Protein GI | 117923777 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.332875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.985136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGGC CGCGAGAGAG CGATGGGATG CCCCAATCCA CCAATCCATC TATGCAACCC
AATCCTGCCC AGGCGAGCAC CCCACAGGCA GTGCCCCCCA GTCCGCGCCC TGCACAGTTG
CGCTTAACCC GCCGCGTGTT AACCTTGCTT ACCCTCTTTG CGCTGCTGGT TGCGCTGGGT
ATAGGCTTGC TCCTAGGGGC GCTGCCGTTT TTGCAGGGAT TTAATCTAAC CGCTTGGTGG
CAGGCTCTGC AACCCCGCCT TTGGACACTA CTGCCAGGTG TTGTTTTACT GGTTGGCACC
ACCCTCTGGC TGTTGCGAGG GGTGGTCTAT CCACTGCTCA ATAGTTACCA TCACCAGCTC
AACGTGCTGG ACCAACAACG CCTAGACCAG CACGACCAGA TCAAACAACA CCAACACCAA
TTGCATGAAG CCAATGCACA CGCGCTACGC TTACAGCGTA TGTCGCAATT TTTGCATCAC
ATTACAGAAT CCACCCAAAT GAGTATGGAT GAAAAAATTG AACAGGGATT AGAGTATGGC
CAATCCCTGT TTGGTATGGA GATCTCCTTT GTTGGTCAGG TACGTGAAGG AATCTGCCGG
GTTATCCACG TCTTAAACAG CGACACGTTG CAAAAGAATA GCCGTTTGGT GATGGATAAT
AGATGCTGTT TAAAGCAGCT GGCACAGAAT GAACAAGGGG TCGTCTCGCC GCTGTTAAGT
GCCTGTTGTG CGGAGATGGT GTGTGCCCAA CTCCACCAGT TTCAAGCGCT TATTTGTGCC
CCCTTGGTGG TGGAACATCA ATCCTATGGG GTGTTGGCAT TTGCCAGTAT GCAACCCTTT
CAATCGCTGG ATAGCCGTAG AGATGAAGCC CTCTTGGAGC TATTGGCGCA ATGGGTGGGT
ACCCATCTGG CGCAGCAACA ACGGATGCAG GCGCTCCAGT GGAGCAACGA ACGTCTGGCC
CGCTTTCGTG CCACGTTGGA CCATCTGGAT GATATGATCG CCTTGGCCGA CCCACGTACC
CTACGGTTTG TGGATGTCAA CCGAGGTATG GTGGAGAGCA CCGGGTTGAG CTTGGATGGC
TTGTTAAGCA AACGCCTCGC CGACCTTACG ACCCCCCAAT CCCAAGCCAA AGTCAACCGG
ATCATGAACC GCTTGGTGGT TGGCCTAGAC CGCATGCTAC GCTTTGAGGT AACGCTTCAA
CATACCAATG GATCATGCAT CGAGACCGAT GCTTTGGTGC AGTGGGTGGA GCTGGAAGCG
GGTAAGCCGG TGGTGGTACA TATGCTGCGC GATGCCACCG AGCGTAAACG CGCCGAGACC
GCCCTACGGG TTAGTGAAGA GCGCCTTACC TTTGCCCTGG AAGGCTCCAA CGATGGCTTG
TGGGATTGGA ATATTGCCGA AGATAACCTG CACTGTAGCC CTCGCTTAGA AGCGATGTTG
GGCTTTCGAC GGGGCAGTTT AACCGGCAGC ATGGCGCGGC TTAAATCCAT GATTGTGGAG
CAAGAGCGCC CAGGGGTAGA GGCGCTCTTG CGCATTCACC TAGATGGTCA TGTGGATCTC
TATGAAGCCG AATATCGCAT CAACTCAGCC AGTGGTCGAC TGCTCTGGAT TTTAGACCGA
GGTAAGGTGG TGCAGCGCAA TAGCAAGGGC CAACCGATCC GGGCGGTGGG GACCTTTACC
GATATTACCG CGCGTAAAGA TATGGAAGCC GCCTTGCACG ATGCCAAGGT CGAGGCGGAG
TCCGCCAGCC GTGCCAAAAG TCGCTTTTTG GCCAACATGA GCCACGAAAT CCGCACCCCT
ATGAATGCCA TTTTGGGGCT TTCGTCGCTG GCTTTGGAGC AGGCTAAAGA AGCGCGTCAG
CGGGATTTCT TAGAGAAAAT CAACCATTCT GGTCACTTTT TAATGGGTCT GCTCAACGAT
ATTTTGGATC TCTCCAAAAT CGAAGCTGAG CGTATGGATC TGGAGTCTCA ACCCTTTCGG
TTGGATGAGT TGCTCAAACA GTTGGCGGCC AATGTACTAC CCGCCATGCG TAATAAAGCG
GTAGAGGTGC ATTTTTTCAT CGCATCGGGT ACCCCCTTGG CGCTGGTTGG GGATGCCTTA
CGCTTGGGGC AGGTGTTGCA CAATCTGTTG AGCAACGCCA TGAAATTTAC CCATGAGGGG
GAGGTGCGTA TCACCCTCAC CGCAGAGCCC TATGTCCAAT TGACCGATCA CTACCTCTTT
ACCTTTGAGG TTAAGGATAG TGGCATTGGT ATTCCGGCGG AGGTGCAGCC CAAACTCTTT
GAATCCTTTA TTCAAGCCGA CAGTTCCACC ACCCGCCAAT ATGGGGGTTC AGGGCTGGGT
CTGGCGATCT GCCGCCGCTT GATGGAGATG ATGCACGGCA AGATCACTTT GCAGAGCAGC
TTGGGGCAGG GTTCCACCTT TACCTGCCGT TTGCCCTTAC AGATCCAATC TTGCACAGTC
ACATGCTGCC CAATGCCAGA GGATGCCTTT AAAGGGCAGC GTTTGCTGGT GGTGAGTAAC
AGCGGCTCGT TACCAGAATC CATTCAGTTT TCCATGGGCT CGCTGGATCT TCAGCTACGC
CATACCGTTG ATCCCGAGGC CATGGCCGCG CTGGTTGCCC AGGGGTTTTA CCCCGATGTG
GTATTGCTGG ATGACAATTG TGGCGATAGC ACTCAGCTGG TCAATGCGAT TTCACAGTTT
ACCCTCATGA TGACGGAGCA AAAAAAACCC ACCATACTCA TGACAACCGT ACACCAGGAT
AGTACGCTGC TGGAGCGTCT GAGTGCGGCG GGGATGGATG GCGTGCTGGA TAAACCCTTA
CTGCCCATGG CGCTCTATGA TGTGTTGATG CGCCTTTTAC ATACCGGTTC CCTGAATATG
GGGGGGTTGG AGAGCGTCAG CAGCCGGGAC CATGCCGCCC ATTTGGCGGG GTTGCATGTT
CTTTTAGTGG AGGACCACGA CCTTAATATG GAGGTGGCAA AAGCCATTTT GGAGCGGGTT
GGCATACGGG TGATCACCGC GCAGCATGGG GGCGAGGCGT TGGCGCTGTT AGAGCAGACC
GAGGGAGCCG CCTTTGATGC CATCCTTATG GATCTACAAA TGCCGGTGAT GGATGGTTTT
GAAACAACAC GGGTAATACG CAGTAAAACG GCTTGGGCTC AGCCACCCAT TATTGCCCTG
ACGGCCAATG CCTTTAGCCA AGACCGGGAG CGGGCTTTAC AGGTGGGTAT GAACGACCAT
ATCACCAAAC CCATCGCTCC AGGGTTGCTC TATGCGGCCT TGGAACGTTG GATCGACCGT
AAAGATCGTG CCATCGGCCA TCTGGATCTA TTAAGTCAGG CCGAGGAGGT GGTGGTGTTT
CCCCCTTTGC AAGGGTGGCA ACAGCAGCAG GTGTTGATCC GCTTTGAAGG TGATGAGGCG
TTGGTGCGGC GTCTGTTGGA TCGGTTGGTG GAGGAGTGTC ATAGGCTGCT CTCCCATGTG
GAGCCCCTGT TGACACAACA GGCGTGGCCT GAGCTGTTGG CCAGCGTACA TGGCTTTAAG
GGTATTACCG GCAATTTGGG GTTAGAAATC TTGCAAAAGA ATGCCTCAAT CATGGAACAA
GGGCTGTGCA AAGAGCGGGT GGTGGCCTCC CAGGTTGCCC AGCATTGGCA TATTTTAGCA
GGCTCAATCC GCGATTTTGT AGGGACCTAT GGGCAGTGGC AGCAGCAGTG TATGGAGGGG
GATAAAGGGC ACGGGAAGCG TGATGAGCAG GGTAAAGGGG ACGATATCCT GCAAGAACTT
TTAGAGCTAT TGGCCGGACG CCAAATGGGC GCGCGGGACC ACTATAAGCG ACATCGTAGG
GTATTGATGG CGTGGTTGGG CGAAAGCAAG GCCGCAGCCT TAGAAAAGGC CATGGCAGAA
CTTGATTTTG TAACCGCAGA GAAGGTGCTC TTGAGCCGCT CATAG
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| Protein sequence | MQRPRESDGM PQSTNPSMQP NPAQASTPQA VPPSPRPAQL RLTRRVLTLL TLFALLVALG
IGLLLGALPF LQGFNLTAWW QALQPRLWTL LPGVVLLVGT TLWLLRGVVY PLLNSYHHQL
NVLDQQRLDQ HDQIKQHQHQ LHEANAHALR LQRMSQFLHH ITESTQMSMD EKIEQGLEYG
QSLFGMEISF VGQVREGICR VIHVLNSDTL QKNSRLVMDN RCCLKQLAQN EQGVVSPLLS
ACCAEMVCAQ LHQFQALICA PLVVEHQSYG VLAFASMQPF QSLDSRRDEA LLELLAQWVG
THLAQQQRMQ ALQWSNERLA RFRATLDHLD DMIALADPRT LRFVDVNRGM VESTGLSLDG
LLSKRLADLT TPQSQAKVNR IMNRLVVGLD RMLRFEVTLQ HTNGSCIETD ALVQWVELEA
GKPVVVHMLR DATERKRAET ALRVSEERLT FALEGSNDGL WDWNIAEDNL HCSPRLEAML
GFRRGSLTGS MARLKSMIVE QERPGVEALL RIHLDGHVDL YEAEYRINSA SGRLLWILDR
GKVVQRNSKG QPIRAVGTFT DITARKDMEA ALHDAKVEAE SASRAKSRFL ANMSHEIRTP
MNAILGLSSL ALEQAKEARQ RDFLEKINHS GHFLMGLLND ILDLSKIEAE RMDLESQPFR
LDELLKQLAA NVLPAMRNKA VEVHFFIASG TPLALVGDAL RLGQVLHNLL SNAMKFTHEG
EVRITLTAEP YVQLTDHYLF TFEVKDSGIG IPAEVQPKLF ESFIQADSST TRQYGGSGLG
LAICRRLMEM MHGKITLQSS LGQGSTFTCR LPLQIQSCTV TCCPMPEDAF KGQRLLVVSN
SGSLPESIQF SMGSLDLQLR HTVDPEAMAA LVAQGFYPDV VLLDDNCGDS TQLVNAISQF
TLMMTEQKKP TILMTTVHQD STLLERLSAA GMDGVLDKPL LPMALYDVLM RLLHTGSLNM
GGLESVSSRD HAAHLAGLHV LLVEDHDLNM EVAKAILERV GIRVITAQHG GEALALLEQT
EGAAFDAILM DLQMPVMDGF ETTRVIRSKT AWAQPPIIAL TANAFSQDRE RALQVGMNDH
ITKPIAPGLL YAALERWIDR KDRAIGHLDL LSQAEEVVVF PPLQGWQQQQ VLIRFEGDEA
LVRRLLDRLV EECHRLLSHV EPLLTQQAWP ELLASVHGFK GITGNLGLEI LQKNASIMEQ
GLCKERVVAS QVAQHWHILA GSIRDFVGTY GQWQQQCMEG DKGHGKRDEQ GKGDDILQEL
LELLAGRQMG ARDHYKRHRR VLMAWLGESK AAALEKAMAE LDFVTAEKVL LSRS
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