Gene Mmc1_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0429 
Symbol 
ID4483916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp513677 
End bp514663 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content56% 
IMG OID639721177 
Productsuccinate dehydrogenase subunit B 
Protein accessionYP_864361 
Protein GI117923744 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC AGGTTTACAC CCTGCGCATT CAACGCAACG TGCGCCGCGA TGACGGCACA 
CTGGAAACCA AATGGGACGA GTTCCAGGTC AAGGCCACCC CTTTGACCCC CGTTCTCAAC
CTGCTAGAAG ATGTTAAAGG CAATCAGGAC GGCTCACTCA CTTTCCGTCA GTCCTGTCGT
TCGGCCATCT GCGGCTCTTG CGCCATGCGC ATTGGTGGCA AAACCCGTCT GGCCTGTAAA
ACCCAGATTG GTGAAGTGGT GGACGAAAAT AACACCGTGC AAATTGCCCC CCAGCAAAAC
TCGCCGGTGC TCAAGGATTT GGTGGTGGAC ATCACCAAAT TTTTCAACAA AGTGCATCAG
ATCAAACCCT ACCTACAAGA GGGGGCTGAG AGCGCAACCG AGGTCAATGA TACCGCCTTT
GATCAGGTTA ACCATGTGAC CCAGTGCATC ATGTGCGCCT GCTGCTTCTC CGACTGCACC
ATGGCCGAGG TCTCCGATGC GTTTATCGGT CCAGCGGCGC TGGCGAAGGC GTTCCGGTTT
GTCTCCGACC CCCGCGAGGG GAACAAACGG GAGCGGCTGC GGGTGCTCTC GCAAGATCAC
GGCATCTGGT CCTGTTCGCG CTGCACCATG TGCGTGATGG TCTGCCCCAA GGATGTTAAA
CCCATGGAGG CCATCGTCAA GCTACGTACC CGTGCGATGG ATGCCGGCAA TGTCAGCGGC
TATGGGGCCA AACATGCCCA GGCGTTTCAT GGTGATATCA CCAGCAACGG CAGCTTGAAC
GAAGCGTTTA TTCTAAACCG CACCCTGGGG GTATTGGGTG CCTTGGGTGA GATGGGCGCT
GCGCTGCACT TGGCCAAAAA GGGTAAAATT CCTTCGCCCT TCCCCCACAA GATTGCCAAT
CTTGGTGAGG TACAGGCGAT CTACGACGCG TTGGAAAAAA ATCCACTTGA CGTAGAAACC
AAAGCTGAAA ATGCCGTTCC TGAGTGA
 
Protein sequence
MSDQVYTLRI QRNVRRDDGT LETKWDEFQV KATPLTPVLN LLEDVKGNQD GSLTFRQSCR 
SAICGSCAMR IGGKTRLACK TQIGEVVDEN NTVQIAPQQN SPVLKDLVVD ITKFFNKVHQ
IKPYLQEGAE SATEVNDTAF DQVNHVTQCI MCACCFSDCT MAEVSDAFIG PAALAKAFRF
VSDPREGNKR ERLRVLSQDH GIWSCSRCTM CVMVCPKDVK PMEAIVKLRT RAMDAGNVSG
YGAKHAQAFH GDITSNGSLN EAFILNRTLG VLGALGEMGA ALHLAKKGKI PSPFPHKIAN
LGEVQAIYDA LEKNPLDVET KAENAVPE