| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0404 |
|---|
| Symbol | |
|---|
| ID | 4480888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 478142 |
|---|
| End bp | 478981 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639721152 |
|---|
| Product | thymidylate synthase, flavin-dependent |
|---|
| Protein accession | YP_864336 |
|---|
| Protein GI | 117923719 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCT CAACAGGTAC TGCATTCCAA TCTGAACCCA CCCTAGAAAT GGCTGCAGAG
ATTGAGACAC GTCTGCAACT TAATCCGGAT TACACCAAGC GCATTGGCAA TTTTGGCTTT
CTAGAGTTGG AAGAGAGTTG GGGAGATGAA GCCACGATTA TTAATACCGC TCGCATCTCC
ACCACCAACA AACGGGTTAA CAGTCTGGAC GCGTTTACCG ACAAAGAGCG CACGTTGCTT
CACTATCTGT TGGCGCACAA CCATGGTACC CCGTTTGAGA CGGTCCACTT TCGCTTTCGT
GTGGTGGCCC CCATTTTTGT GCTGCGCCAG TGGATGCGCC ATCGCATTTG CTCATTTAAT
GAGTTTTCCC AGCGTTATCG TATGCCGATA ACCGCCTTTT ATGTGCCCGA TCAAGAGGCC
CGTACGGTGG ATGGTTTTGA GGTGCTTAGT CAGGAGTCGG TGGAGCGCTA TTGCGAGTTG
GTGGAGTCGA TGCACCGTTT TTACCATGAT GAATACCAAC AGGTGTGTAC GCGCATTGAG
GCTGCCGAGC AGGCGGGCCT TGTGGAAAAA ACCGCAGGCA GTCGCAACCC TTACCGCGCC
CGTGCCCGCG AACTGCTGCG TAATGCCATG CCGGTAAGTA CCTATTCGGA TCTTTACTGG
ACCATTAACT TTCGCGCCCT CATGAACTTT TTTGAGCTAC GCCGCAAAGC CAATGCCCAG
TATGAGATCC GTGCATATGC CGATGCCGCG TATGAGATGT TTTGTAAAAA AATGCCCCTG
TTGGGCGAAA CCATGAATCG TGTTTTGGAA GAGCGTGCCA AAATGGGTGA GCAAGCATGA
|
|---|
| Protein sequence | MEASTGTAFQ SEPTLEMAAE IETRLQLNPD YTKRIGNFGF LELEESWGDE ATIINTARIS
TTNKRVNSLD AFTDKERTLL HYLLAHNHGT PFETVHFRFR VVAPIFVLRQ WMRHRICSFN
EFSQRYRMPI TAFYVPDQEA RTVDGFEVLS QESVERYCEL VESMHRFYHD EYQQVCTRIE
AAEQAGLVEK TAGSRNPYRA RARELLRNAM PVSTYSDLYW TINFRALMNF FELRRKANAQ
YEIRAYADAA YEMFCKKMPL LGETMNRVLE ERAKMGEQA
|
|---|
| |