Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0363 |
Symbol | thrS |
ID | 4481223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 416837 |
End bp | 418783 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721111 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_864295 |
Protein GI | 117923678 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0255987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA TTATACTTCC CGATGGCAGC AGCCGCTCCT ATGACCAAGA GACGCTGACC TGTGGTCAGA TTGCGGCCTC CATTGGCAAA GGGTTGGCGA AGGCGGCCAT TGCCGGGGTG GTGAATGGGC AAAAGGTGGA TCTAGATGCG CCGGTGCCCC ATGGTGCCCA GGTGGCGATT ATTACGGAAG ATAGCCCAGA GGGCTTGGAG ATCATTCGCC ACTCTGCAAG TCATTTGATG GCGCAGGCGG TTAAAACCTT GTTTCCTCAA GCGCAAGTGA CCATTGGTCC TGCCATAGAA AACGGGTTTT ATTACGATTT TGATTATGAG CGACCCTTTA CCCCGGATGA TTTAACCGCC ATTGAAAACT GCATGCGCAA GTTGGCCAAG CGCAATGAAA AGGTTGAGCG GCGGGTGATG CCCCGTGATG AAGCGGTGGC CTATTTTCAG GCGATGGGCG AGCTCTACAA GGCAGAGATT ATTGGGGCGA TCCCGGCGGG GGAGGATGTC TCCCTTTATA GCCAGGGTGA GTTTACCGAT CTATGTCGGG GGCCCCATGT GCCCAGCACC GGTAAGTTAA AGGCGTTTAA GGTGATGAAG GCGGGGGGTG CCTACTGGCG TGGGGATTCT CGCAATAAAA TGTTGCAGCG CATCTACGGT ACCGCCTGGG CGACAGAGGC TGATTTAAAG GCCTATCTGA CCCAGATGGA AGAGGCCGAG AAGCGGGATC ATCGGCGTAT TGGCAAGGAT CTGGATCTCT TCTCGGTGCA GGAGGATGCG GGGGGTGGTT TGGTTTTTTG GCACCCCAGG GGTTCGCGCA TTCGCCGGGT GATTGAGGAT TTTTGGAAAG ATCGCCATGT CGAGGCGGGT TATGAGTTCC TCTACACGCC ACATATTGCC AATCGGCAGT TGTGGAACAC TTCTGGGCAC ACCGATTTTT ATTCGGATTC GATGTTTTCG CCCATGGAGG TCGATGAACA GGCGTACCAG ATTCGCCCCA TGAACTGCCC GTTTCATATC CTGATTTACA AGGATCGGCG GCACTCCTAT CGTGAGCTAC CGTTCCGTTG GGGAGAGTTG GGCACGGTCT ACCGTTATGA GATGTCTGGG GCGTTGCATG GCCTGTTTCG GGTACGGGGT TTTACCCAGG ACGATGCCCA TATCTTCTGC ACAGAACAGC AGATTGAGGA GGAGATTCAG CGGATTTTGG ATTTGACGCT GGATATTCTG CGCACCTATG GCTTTAGTGA TTTTGAGATC AACCTTTCCA CCCGTCCGGA GAAGTCGGTG GGGAGTGCGG CGATCTGGGA CAAAGCGACT GAGGCGCTGC GGCGGGCCAT TGTCTCGCGG GATCTGAGCT ATGTGGTAGA TGAGGGCGGT GGCGCGTTTT ATGGCCCTAA AATTGATGTT AAGATAACCG ACTCCATTGG GCGCAAGTGG CAGTGTTCGA CGGTGCAGTT GGATTTTAAT CTGCCTGAGC GGTTTGATAT GGGCTATATT GGCGAGGATG GCGAGAGTCA TCGTCCCATT ATGATCCACC GGGCATTGAT GGGTTCGTTG GAGCGCTTTT TTGGCATTTT GGTGGAGCAC TATGCGGGGT GGTTTCCCAT GTGGTTGGCT CCAGTGCAGG CGGTGGTGTG TAGCATTACC GATGCACAGC ATGCTTATGC TGAAACGGTG TTGGCAGCGT TGAAAAAAGC GGGCTTGCGG GTAGAAATCG ACCTACGTAA TGAAAAAGTG GGTTATAAAA TTCGCGAACA TACGCTAAAA AGGGTACCTT ACCTATTGGT GGTGGGGGAT AAGGAGCGGG AAGAGGGGAC GGTTAACGTT CGTCTACGCT CTGGCAAGAG TTTGGGTAGT CTGCCTATAC AAGATGTGGT TGAGCGTCTT GTGGAGGAGG CCGCCAGTCG TGCCCTTTCT GCTTCGGAAG ATCAGGAAGA GGCGTAA
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Protein sequence | MVEIILPDGS SRSYDQETLT CGQIAASIGK GLAKAAIAGV VNGQKVDLDA PVPHGAQVAI ITEDSPEGLE IIRHSASHLM AQAVKTLFPQ AQVTIGPAIE NGFYYDFDYE RPFTPDDLTA IENCMRKLAK RNEKVERRVM PRDEAVAYFQ AMGELYKAEI IGAIPAGEDV SLYSQGEFTD LCRGPHVPST GKLKAFKVMK AGGAYWRGDS RNKMLQRIYG TAWATEADLK AYLTQMEEAE KRDHRRIGKD LDLFSVQEDA GGGLVFWHPR GSRIRRVIED FWKDRHVEAG YEFLYTPHIA NRQLWNTSGH TDFYSDSMFS PMEVDEQAYQ IRPMNCPFHI LIYKDRRHSY RELPFRWGEL GTVYRYEMSG ALHGLFRVRG FTQDDAHIFC TEQQIEEEIQ RILDLTLDIL RTYGFSDFEI NLSTRPEKSV GSAAIWDKAT EALRRAIVSR DLSYVVDEGG GAFYGPKIDV KITDSIGRKW QCSTVQLDFN LPERFDMGYI GEDGESHRPI MIHRALMGSL ERFFGILVEH YAGWFPMWLA PVQAVVCSIT DAQHAYAETV LAALKKAGLR VEIDLRNEKV GYKIREHTLK RVPYLLVVGD KEREEGTVNV RLRSGKSLGS LPIQDVVERL VEEAASRALS ASEDQEEA
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