| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0277 |
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| Symbol | |
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| ID | 4482330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 314696 |
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| End bp | 314953 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639721026 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_864210 |
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| Protein GI | 117923593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0264829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTAATA GCCATGCTGG ACACAATGTA CAGGACCCGT TTTTGAACAC ACTACGTCGG
GAGAAGGTGC CGGTTACGGT GTTTTTGGTT AACGGTATTA AATTACAGGG GATGATCACC
TCCTTTGACA ACTATTGCCT ACTGCTGAAA AACAGTGTGA CGCAGTTGGT GTTCAAGCAT
GCCATATCAA CGGTTATGCC ATCGCGCAAC ATCCATATGG GTGATGAGCG TGATGATGCT
AAAGAGAGTA AGGAATAA
|
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| Protein sequence | MGNSHAGHNV QDPFLNTLRR EKVPVTVFLV NGIKLQGMIT SFDNYCLLLK NSVTQLVFKH
AISTVMPSRN IHMGDERDDA KESKE
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