| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0263 |
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| Symbol | |
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| ID | 4482316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 299982 |
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| End bp | 301340 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721012 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_864196 |
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| Protein GI | 117923579 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.992448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG CAAAAGAACA GTTTGTCTGT ACCGAGTGCG GGGCAGAGTA CAGTCAGTGG
CAAGGAAAAT GTCACACCTG CCAAGCATGG AACAGTCTCA AGGCATTTAC CCCGGCTAAA
AAAGGGGCGC GTGCGGCCCA TCCCACCCTT GGGGTGGCCA TGGAGCCCAT TACTCTGGAT
AGCGTGGCGG GGGGTGAAGC CCCCCGCATT CAAATTGGGA TCTCAGAGCT AGATCGGGTG
CTGGGTGGGG GTTTGGTCTC TGGGGCCGCC ATCTTAATTG GTGGGGATCC AGGCATCGGT
AAATCGACCT TGCTCATGGG GGCGTTGGCC AAATTGAGCA CCAGCCTGCG GGTGTTGTAT
GTCTCGGGTG AAGAGTCGCT GATACAGCTC AAGCTGCGGG CGGAGCGCAT GGGGGTGGAT
GGCGCCAACT TTTGGGTGTT CATGGAAAAC CGCTTAGAGG CGGTGGAAGA GGCGGTAAAT
AAACAGCAGC CTGATGTGCT GGTGGTGGAC TCAATCCAGA CCATCGCCGG GGATGAAATT
CCCTCTGCTG CGGGCACGGT GACCCAGGTG CGGGAGTGTG CCTCGCGCAT GATTCAGTGG
GCTAAGCGGC GCAATATGGC GCTCTTTCTC ATCGGTCATG TGACCAAAGA GGGGCAGATT
GCTGGTCCGC GTATTTTGGA GCATATGGTG GATACGGTGC TCTATTTTGA GGGGGAGCGG
GGCCATAGTT ACCGTATTTT ACGGGCGGTT AAAAACCGCT TTGGGGCGGC CAATGAGATT
GGCGTGTTCG AGATGCGTGA GAACGGTTTG GCGCAGGTAA CCAACCCTTC AGAGCTGTTT
TTAGCCGAGC GGGTAGGTGG AGCGGCGGGC TCGGTGGTTT ATGCGGGGTT GGAGGGCACA
CGGCCCGTTT TGATTGAAAT TCAATCCCTG GTTACCCCCA GCCCGCTCCC CCAACCCCGG
CGCAACACGG TGGGGATAGA TACCAACCGC TTAGCGATGC TCATTGCGGT GTTGGAGAAA
CGGTTGGGGT TGGGGCTGTT TAACCACGAT ATTTTTCTGA ATGTGGCGGG GGGATTTCGC
ATCAATGAGC CCTCGGCGGA TTTGGCAGTG ACGCTCTCCC TTTATGCAGC GTTGCGAAAC
ATTAGTCTGG ACCCTGGCAT GGTGGTGCTG GGCGAGGTGG GTCTGGCAGG GGAGGTGCGG
GCGGTCTCCC ACGCGACGAC CCGTTTAAAA GAGGCGCAAA AATTAGGTTT TACCCGCTGT
ATTTTACCAA AAAAAAGTAT GAAAGGGGTG CCCGATGGGT TGGGTATTAC CCTGCATCCG
GTGGCGCTGA TTGAAGATGC TATTGCGCTG TTGGCATGA
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| Protein sequence | MAKAKEQFVC TECGAEYSQW QGKCHTCQAW NSLKAFTPAK KGARAAHPTL GVAMEPITLD
SVAGGEAPRI QIGISELDRV LGGGLVSGAA ILIGGDPGIG KSTLLMGALA KLSTSLRVLY
VSGEESLIQL KLRAERMGVD GANFWVFMEN RLEAVEEAVN KQQPDVLVVD SIQTIAGDEI
PSAAGTVTQV RECASRMIQW AKRRNMALFL IGHVTKEGQI AGPRILEHMV DTVLYFEGER
GHSYRILRAV KNRFGAANEI GVFEMRENGL AQVTNPSELF LAERVGGAAG SVVYAGLEGT
RPVLIEIQSL VTPSPLPQPR RNTVGIDTNR LAMLIAVLEK RLGLGLFNHD IFLNVAGGFR
INEPSADLAV TLSLYAALRN ISLDPGMVVL GEVGLAGEVR AVSHATTRLK EAQKLGFTRC
ILPKKSMKGV PDGLGITLHP VALIEDAIAL LA
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