| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0254 |
|---|
| Symbol | |
|---|
| ID | 4483574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 287331 |
|---|
| End bp | 287723 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639721003 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_864187 |
|---|
| Protein GI | 117923570 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.600084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCAAA AAATTGCCAT TGCTACCCCC CACGCTCCCC AAGCGATTGG GCCATACAGT
CAGGCCATTC AACAGAATGG TTGGCTCTAT ATTTCGGGTC AGATTGCCTT AGATCCCACT
ACGGGTGTGG TGGTGGGGCA GGGCGATGTG GGGGCAGAGA CCCATCGCGT TATGCAGAAT
TTGGCGGCAA TTTTAGAGGC GGCTGGGGGA GGGTTTAAAG ATGTGGTGAA GTGTCAAATT
TTTTTGGCCG ATATGGATGA CTTTGCCACG GTCAACGAAA TTTATGCTTC CTACTTGTCA
GAACCCTTTC CTGCGCGGGC TACGGTGCAG GTGGCGAAGT TGCCAAAAGG GGTTAAGGTG
GAGATTGATG CCACCGCATT TGTTGGGGGT TGA
|
|---|
| Protein sequence | MHQKIAIATP HAPQAIGPYS QAIQQNGWLY ISGQIALDPT TGVVVGQGDV GAETHRVMQN
LAAILEAAGG GFKDVVKCQI FLADMDDFAT VNEIYASYLS EPFPARATVQ VAKLPKGVKV
EIDATAFVGG
|
|---|
| |