| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0252 |
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| Symbol | |
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| ID | 4483572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 284490 |
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| End bp | 284855 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721001 |
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| Product | DNA-directed RNA polymerase, omega subunit |
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| Protein accession | YP_864185 |
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| Protein GI | 117923568 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00381696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TTACCGTTGA TGATTGTGTA CAACATGTTT CCAACCGCTT TGAGTTGGTG
ATTTTGGCCG CCAAGCGGGC CCGCCAGCTG GCCAAGGGTG CTGAGCCCGA GGTTTCAGTG
GATCGTGATA AAAATACCGT GGTTGCTCTG CGTGAGATTG CCGAGTCCAA GTTAAATATG
GATGATCTGC GTCGTATGGA AGAGACGGTA GTCGAAGAAG AGGTGGTGGA TGAGGTGATT
CGCTTTGAAA TAGCCGATCT TGCTGTTTCT GACGATCTTG CCGATGGCGA TGCTGCCAAT
GATCTACAGG GTGAAGAAGA TGACCTGGGC TTGGGTTTGG ATGAAGCCGA GGATCTGGGT
TTCTGA
|
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| Protein sequence | MARVTVDDCV QHVSNRFELV ILAAKRARQL AKGAEPEVSV DRDKNTVVAL REIAESKLNM
DDLRRMEETV VEEEVVDEVI RFEIADLAVS DDLADGDAAN DLQGEEDDLG LGLDEAEDLG
F
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