Gene Mmc1_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0247 
Symbol 
ID4483567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp280715 
End bp281107 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID639720996 
ProductSSU ribosomal protein S9P 
Protein accessionYP_864180 
Protein GI117923563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00762963 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAG AAACCTTCAA TGCCACTGGT AAGCGTAAAG AGTCTGTGGC CCGTGTACGC 
ATCGTGCCTG GCAGCGGTAA AGTGACCATC AACCAAAAGC CGATGGATGT CTATTTTGGC
CGTCCTGTGC TGCGTATGGT GGTAAACCAG CCCTTCTCCG TCACCGAGAT GGAAAATAAG
TTTGACGTAT TGGTCAATGT GCATGGCGGT GGGGTATCGG GTCAAGCCGG GGCCATCAAG
CACGGTATTT CCAAAGCGCT GGTGGATTAT GATGAAGCGC TGCGTCCGGC CCTGAAAAAA
GCGGGTTTTC TAACCCGTGA TGCGCGTACC GTTGAGCGTA AAAAGTACGG TCGCCACAAG
GCACGTAAGA GCACCCAGTT CTCCAAGCGT TAA
 
Protein sequence
MAQETFNATG KRKESVARVR IVPGSGKVTI NQKPMDVYFG RPVLRMVVNQ PFSVTEMENK 
FDVLVNVHGG GVSGQAGAIK HGISKALVDY DEALRPALKK AGFLTRDART VERKKYGRHK
ARKSTQFSKR