| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0237 |
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| Symbol | |
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| ID | 4481686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 266384 |
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| End bp | 267391 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639720983 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_864170 |
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| Protein GI | 117923553 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA CCTGGTCGAC CCTGCTCTTA CTCGTCAGCC TGCTGCTGAG TGGCTGTAGC
GAGAAGGTGG AGAACACCAC GCAGTTACGT ATGGGCACCT GGGTGAGCAT CTCCACCCTT
GGCCAACATG GTGCTGCGGT GGAGGCTGCC TTTGCCGAGA TGGGCCGCCT GGAAAAAGCC
CTTAGCAGCC ACGACCCAAA CAGCCCCATT TCGCGCATCA ATCAGGGTTC GGTCAACCAG
TGGCACCCCT TGGATGATGA AACCGCGCAG CTGCTGGAAC GCGGATTAAT CATTCAAAAA
GCCTCCCTTA ACCGCTTTCA CATGGGGCTC TATCACCTCT CCCAACTCTG GGGTTTTATG
TCAGAAACCC CCCTCTCGCA GCCCCCGGCG CTTCCCCTGC GGGAGATGTG GCGTCAGCAA
GCCACCCCCA ACCTAGAACA CGCCTTTAGC CTGAGCAAAC AGCCGGATAC CACCACCCTA
CGCATCAACA ACCCCGCCTT TGGCCTGGAT CTGGGGGCCA TTGCCAAAGG GTATGCCATC
GACCGAGCCA TCGCTGTGCT CAGGGCTCAT GGGGTAGAGA ACGCCATTGT CAATGCGGGG
GGGGATCTGC GGGTCATTGG CTCCAAGTTT GGCCAACCTT GGCGTATTGG TATCCAAGAC
CCCACCGATA AAGAGCGGGT CATCGCACGC AGCGATCTAC AGGGGGATCG TGCCATGGTC
ACTTCTGGCG ACTATGAACG CTTTTTTATC TATCAAGGAC GCCGCTACCA CCACATCCTT
GACCCCATGA GCGGGGAACC CGCCGATTAT GGTTGGCGTT CGGTCTCCGT CCAAGCGGCT
GATGCTGAAA CCGCCGATGC CCTCTCCACG GCTCTGTTTA CCATGGATTT GGCGCAGGGT
AAGCGGCTGC TCGAACAGTT CCCCGGCTGT CAGGCACTCT GGGTGGATCA ACAGGGGGAG
CACCAGCAGA GCGAAGGGTT TATCGGCCAA TGGCTCACCC CCTCTTAA
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| Protein sequence | MSRTWSTLLL LVSLLLSGCS EKVENTTQLR MGTWVSISTL GQHGAAVEAA FAEMGRLEKA
LSSHDPNSPI SRINQGSVNQ WHPLDDETAQ LLERGLIIQK ASLNRFHMGL YHLSQLWGFM
SETPLSQPPA LPLREMWRQQ ATPNLEHAFS LSKQPDTTTL RINNPAFGLD LGAIAKGYAI
DRAIAVLRAH GVENAIVNAG GDLRVIGSKF GQPWRIGIQD PTDKERVIAR SDLQGDRAMV
TSGDYERFFI YQGRRYHHIL DPMSGEPADY GWRSVSVQAA DAETADALST ALFTMDLAQG
KRLLEQFPGC QALWVDQQGE HQQSEGFIGQ WLTPS
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