Gene Mmc1_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0216 
Symbol 
ID4483768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp237795 
End bp239591 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content54% 
IMG OID639720961 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_864149 
Protein GI117923532 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGTA TCTGTGGGGT AATGTATTTC CAACCTCAAA CACCCCAACC AGCGATGCTG 
GAAAAAATGG TCGAAAAACT CCACCAGCGT GGCCCCGATG GTGGAGGGAT TGAAATAGAC
GGGCAGCTTG GTTTGGGCCA TAGGCGTTTG AAAGTTATTG ACCTATCTGA AAATGGTCAT
CAACCCATGC AGGATGATGC GCTGGGCCTG ACCATTGTGT TTAATGGGTG TATCTATAAC
TACCAAGCAC TGCGTCAATC CCTGCTGGAG CTGGGCTACA GCTTTTTTTC AACCAGTGAT
ACCGAGGTTA TCTTAAAGGC GTACCATGCT TGGGGTTGGC AGTGTGTGCA GCGCTTTAAT
GGCATGTTTG CGTTTGCCAT TTACGAGCGG CAGAGCGGTA GAGTGGTGTT GGCACGGGAT
CGACTTGGGA TTAAACCCCT CTATATCCAT CAAGATAAAT CCCATTTGCG GTTTGCTTCG
AGCATTCCGT CACTGTTGGC GGGGGGGGGC ATCACAACCA CCCTTGACCC CATTGCCTTA
CACCATTTTC TCTCTTTCCA CAGTGTGGTA CCCGCACCCC GTACGCTGTT ACAACAGGTG
CAAAAACTAC CCCCGGCAAC CGTACGTATT GTGGAGAAAA ACGGTTCTGA AACGAACCAT
ACCTACTGGA ACCTCCAGAT GGGTCCCCAG GCGGGTGATG CAGAGCGTAC CGAAGCGGAG
TGGCAACAGC TGTTGGATCA AGCGCTCAGG GCGGCGGTAT CGCGGCGCTT GGTGGCCGAT
GTGCCGGTGG GGCTGCTGCT CTCTGGGGGG TTGGATTCCA GCTTGATGGC GGGGCTATTG
GTGGAGTCAG GGCAGTTGAG CCGTGGTGGC TTGTCAACCT TCTCCATCGG TTTTGAACAA
GCCGGTGGTG AAGAGGGGGA TGAGTTCCAA TACTCGGATA TTGTGGCGGC TCATTTTGGC
ACGGATCACC ATAAAATTTT CATTGAAACC AACAACCTGC CCGAGCTGTT AAGGGAAACC
GTACGGGCTA TGTCTGAACC CATGGTCAGC CATGATGCGG TGGGCTTTTA TCTGCTATCC
CGCGAAGTGG CCAAGCATGT CAAAGTGGTA CAGAGTGGGC AGGGTGCCGA TGAGGTGTTT
GCAGGGTACC ACTGGTACCC CAAGGTAGAT GCCGGTCAAG ATGCCTTTCA AGATTATAGA
AAAGCCTTCT TTGACCGCAG CCATGAAGAG TGCTGCGAGA TGGTCCATCG CGACATTGCC
GCCGCTTGGC AGCAAGATTA TAGCAGCGCG TTTGTGGAGT CTTGGTTTGC CCACCCCCAT
AGCGGCACAG CGGCGGTGGA CAAGGCGTTG CATCTGGACC AAAACATCAT GCTGGTGGAC
GATCCGGTTA AGCGGGTAGA CAACATGACC ATGGCTTGGG GGTTGGAGGC CAGGGTACCC
TTTCTGGATC ATGAATTGGT GGAGTTGGCC GCGCGTATTC CGGGCCATCT CAAACTGCAA
CAGGGGGGGA AGGGCATTCT AAAAGAGGTC GCCCGCCCCA TTATTCCCCA TGCGGTGATT
GATCGTGCCA AGGGCTATTT CCCCGTGCCT GCGCTCAAAC ATATGGATGG CCCGGTACTG
AAATTGGCCA AAGAGGTGTT GACCTCGCCA CGCGCCACCC AAAGAGGGTT GATCCAACCC
AGCTATATAA ACCGTCTGTT GGATCATCCA ACCCAGCACA TAACCCCGCT GCATGGCTCC
AAACTATGGC AGTTAACCCT GTTGGAGCTA TGGTTGCAGA CCCATGATAT ACACTAA
 
Protein sequence
MCGICGVMYF QPQTPQPAML EKMVEKLHQR GPDGGGIEID GQLGLGHRRL KVIDLSENGH 
QPMQDDALGL TIVFNGCIYN YQALRQSLLE LGYSFFSTSD TEVILKAYHA WGWQCVQRFN
GMFAFAIYER QSGRVVLARD RLGIKPLYIH QDKSHLRFAS SIPSLLAGGG ITTTLDPIAL
HHFLSFHSVV PAPRTLLQQV QKLPPATVRI VEKNGSETNH TYWNLQMGPQ AGDAERTEAE
WQQLLDQALR AAVSRRLVAD VPVGLLLSGG LDSSLMAGLL VESGQLSRGG LSTFSIGFEQ
AGGEEGDEFQ YSDIVAAHFG TDHHKIFIET NNLPELLRET VRAMSEPMVS HDAVGFYLLS
REVAKHVKVV QSGQGADEVF AGYHWYPKVD AGQDAFQDYR KAFFDRSHEE CCEMVHRDIA
AAWQQDYSSA FVESWFAHPH SGTAAVDKAL HLDQNIMLVD DPVKRVDNMT MAWGLEARVP
FLDHELVELA ARIPGHLKLQ QGGKGILKEV ARPIIPHAVI DRAKGYFPVP ALKHMDGPVL
KLAKEVLTSP RATQRGLIQP SYINRLLDHP TQHITPLHGS KLWQLTLLEL WLQTHDIH