| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0194 |
|---|
| Symbol | |
|---|
| ID | 4483475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 211950 |
|---|
| End bp | 215048 |
|---|
| Gene Length | 3099 bp |
|---|
| Protein Length | 1032 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639720939 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_864127 |
|---|
| Protein GI | 117923510 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000134562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAA AGACCAAACT AATCACGCCA GTAATCCTTT TATTGGTCGT CACTGCACTG
GTGGTTTTAC AGGTCTCAAG TACGGCATTG CAACAAAACA CGCATATTCT ACTCGACGAA
CAGATCTCCG CTAAGATGGT CTCTGTTGAT CAAAATATTG AGCGTATGAG TAATACTGCA
CTGTTGGCAT CGGCTATCAT CGCCAATCTT CCCCAGGTTA AAGAGGCTTA CACATTACAG
ACCAGTGACG AAGCGGCCGC GCGCAAGTTG CTTGCTGAGC ATATGGCGCC CATTAAAAAG
ACGGTGGAGC AGATAACCGG GATGAAACAG TTCCGGGTGC ATTTTCACCT GCCCCCTGTA
CGCTCATTTT TGCGCATATG GAATGGTACC GGTGGAGATG ACCTCTCCAG TTTTCGCAAT
ACGGTGCAGC AGATCAATGT GCAGGGTAAA CCGCTAAAAG GCATTGAAAT TGGGCGCGGT
GGCTTTGTGC TTAGGGGGAT AGCCCCCATT ATGAACGATG CCGGTGTGCA GGTTGGGTCC
CTAGAAACTC TGCTGCCTAT GGCAGAGGTT ATGAAAAAAT CCAAGGTGTT GGCCACCGAA
GAGCTGGCCA TTTTGCTGCA TGACCGTTAC CTGTCCATTG CAAAAAAATT GGAGAAATCC
AATCCTAAGC GGGCCGGTAA ATTTGTCTAT ACCGGTTCAA CGAAGGGGTT TCTTGCCGAT
CTGGTTGAAC CCGAGGCGTT ATTATCGGCC ATGCAGAGTG ACCAAAAGCG CGCGCATAAA
CAGCACACTT TGGCTTACCA TTCCATCCGT GATTTCTCCG GTGCCCCAGT GGGGGTTGCC
GTCTACCAAT TGGACCATCG CAAGGTGCTG GCCAATCAGC AACAGATGAT CACCCGACTG
ATCGTGATTA TTCTTATCTT AATGTTGTTC GCTGGATTGG CTTATGCCCT GTTGATTGCG
CGGTTTGTTA AGCGCATTTT TCACATTGCC GAAGAGATTG GCGGTATAAC GGGGGGCGAT
GTAACCCGTC GCTTGGCCAT CGCCACTAAA CCCGATGAGT TGGGTGCTAT CGGTGGCAAC
TTTAACAAGA TGGTACACAG CCTTGCCTCG ACACTGCGAC GGGTCTCTCT ACAAGCTGAA
AGCTTAACCG CCGCCGTACG GCAGTTGGGT GAGGTAAAGA CGGTATTAAC GGAAGATGCC
ACGGCCATTC GCAGCAGGGC CAACCAGACG GATGAAGAGA CGCAACACCA AGTTGAAGTG
GTCGCTAAAA TCCATCAAGC GGTCAAAGAG ACCAACACCT ACATGGATAA CATTGCGCTG
CAATCTGGTG ATTTGGCTCA TAGCATGGAT GAAGTAGCGA ACGATGCAGA ATCCGTATCC
AGTAACGTAA CCACCATGGC GGCCGCCGCT GAGCAAATGT CCATGAACGT AGGGGGTATG
CAGCGCAATA TTGAGCAGGT TAGCCAATCC ATGGTCAGTG TCAATACGGC GGTGGAAGAG
TTGCGCCACG CCTTGGGTGG GGTGGCTCAG CGCTGCCAGC ATGCCCGCAG CGAATCGGAC
CGGGCCAGTC AGCAGTCGGA TGAAACCCGT GAAGCCATTG AGCACCTCTC TGGTTACACC
AAGGAGATTG GCAAAGTGGT GGAGCTGATT AACGCCATTG CCGAGCAAAC CAACATGCTG
GCGCTCAATG CTGCCATTGA GGCCGCCGGG GCAGGTGAAG CCGGTAAAGG TTTTGCTGTG
GTGGCAAATG AGGTCAAAGA GCTGGCTACC CAGACCTCCA GTGCAACCCA AAGCATTGCC
GACCAGATTA ATGCCATCCA AAAACAGACC CGCGTTGTCT ACGATGCCAC TGGTGATGTG
GAGCAGATCG TTCAGAACAT CAACAGCGCC AATATGGAAA TTGCTGAAGC GGTGGCCATG
CAAACATTGG CCATTACAGA AATCAACCAC TCTGTCGAGG CGGTACGTGA GGCTTCAAAC
ACCACCAGTG GCATGGCCGG AGAGTTGGCC TCAGCAGCTA CCGAGGTCGC ACAATCTGCC
AGCATGGCGG CGGGAGGGGT CGAGCGTATT GCCAACTCGG CGGCGGCATC GGCCCACGCA
ACCCATGAAG TGACGGCGGC CAGTGAACGG GCCAAACAGC AGATTGAACA GCTATTCCTC
GTGGCCCAGG AGGTCTCTAC CGGGGTCACG AATGTGGAAC AAAACATGAG CGAGGTAAAG
GATCTATCCC GCTATATGGA GGCCTCTGTA CTACAATTTG GCACCTTGGT TGATATGGTT
AGCAACAGCA CGGAAAATCT AAATACCACC ATGATTGCGC TGAACTGGGG CGAGGCTCCC
TTTGATGTTG AAGGGGTTAA AAAAGCGCAT CTTAACTGGT TAACCCGTTT GAGCCACGTC
ATTATGCGGC GCACCGCCAT GCGTGCGGAG GAGGTGACCG ATGCCCATCA TTGCGAGTTG
GGTAAGTGGA TGGACCGTGA GGGACAAGAG CAATTTGGAC AAACCCCCGT GTGGCAAGAG
GCCGTCAAAG TGCATGAGCG CATCCATGAG CTGGCTAAAG AGGTGGTAAA GGCCAGCAAT
GCCGGCAATC TGGAACAGGC CAACAAGCTG TTTGCTGATT TTAATGCCTA CCGGATCAAT
CTGTTTGAAA ATTTGGATGC CATTTTTGTT GGGCCAGAGG TCGATGCCGA ACCTATCGCG
GTAGTATGGA AACCCAATAT GAGTGTGGGT GTACAGATTT TCGATCAAGA TCACCGGCGT
TTGGTAAGTT ATATCAACCG CCTGGAATTG GCTCATCGGG CCGGTCAAAG CAAAACAGCA
CTTGAGCGTG TCTTACGGGC ACTGACGGAT TACACCCTGA TCCACTTCCG CCGTGAAGAA
AAGATGATGA CCGAGTCAAA CTACCCCGGT GTGCAGGCGC ACAAAGCCCA GCATACCAAA
CTGGAGGATC AGGTGGCGGA TTATAATCGC CGTATGCTAC AAGAGGAGTC GCACATTACA
GAAGAGGTGT TAACGTTCCT AAAAGGTGAG TTCCTGGACC ATATTATGCG GACAGACCAT
GAATATTCTG ACCATTTCAG GAGCAAAGGG ATCATCTAA
|
|---|
| Protein sequence | MKLKTKLITP VILLLVVTAL VVLQVSSTAL QQNTHILLDE QISAKMVSVD QNIERMSNTA
LLASAIIANL PQVKEAYTLQ TSDEAAARKL LAEHMAPIKK TVEQITGMKQ FRVHFHLPPV
RSFLRIWNGT GGDDLSSFRN TVQQINVQGK PLKGIEIGRG GFVLRGIAPI MNDAGVQVGS
LETLLPMAEV MKKSKVLATE ELAILLHDRY LSIAKKLEKS NPKRAGKFVY TGSTKGFLAD
LVEPEALLSA MQSDQKRAHK QHTLAYHSIR DFSGAPVGVA VYQLDHRKVL ANQQQMITRL
IVIILILMLF AGLAYALLIA RFVKRIFHIA EEIGGITGGD VTRRLAIATK PDELGAIGGN
FNKMVHSLAS TLRRVSLQAE SLTAAVRQLG EVKTVLTEDA TAIRSRANQT DEETQHQVEV
VAKIHQAVKE TNTYMDNIAL QSGDLAHSMD EVANDAESVS SNVTTMAAAA EQMSMNVGGM
QRNIEQVSQS MVSVNTAVEE LRHALGGVAQ RCQHARSESD RASQQSDETR EAIEHLSGYT
KEIGKVVELI NAIAEQTNML ALNAAIEAAG AGEAGKGFAV VANEVKELAT QTSSATQSIA
DQINAIQKQT RVVYDATGDV EQIVQNINSA NMEIAEAVAM QTLAITEINH SVEAVREASN
TTSGMAGELA SAATEVAQSA SMAAGGVERI ANSAAASAHA THEVTAASER AKQQIEQLFL
VAQEVSTGVT NVEQNMSEVK DLSRYMEASV LQFGTLVDMV SNSTENLNTT MIALNWGEAP
FDVEGVKKAH LNWLTRLSHV IMRRTAMRAE EVTDAHHCEL GKWMDREGQE QFGQTPVWQE
AVKVHERIHE LAKEVVKASN AGNLEQANKL FADFNAYRIN LFENLDAIFV GPEVDAEPIA
VVWKPNMSVG VQIFDQDHRR LVSYINRLEL AHRAGQSKTA LERVLRALTD YTLIHFRREE
KMMTESNYPG VQAHKAQHTK LEDQVADYNR RMLQEESHIT EEVLTFLKGE FLDHIMRTDH
EYSDHFRSKG II
|
|---|
| |