| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0176 |
|---|
| Symbol | |
|---|
| ID | 4481556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 193405 |
|---|
| End bp | 194511 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639720921 |
|---|
| Product | chorismate mutase / prephenate dehydratase |
|---|
| Protein accession | YP_864109 |
|---|
| Protein GI | 117923492 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000165847 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATG ATCCGATAGA TCTTAACCCT TCCACATTGG TGGAGCTGCG TGATGGTATT
GATGCCATTG ATGATCGCAT CCATGATCTG CTGATGAAGC GGGCTGAGCT GGTGATGCGG
GTGGGGGAGC TTAAGGGCAA GGGGCCGGCG GGTACGCCTT TTTATCGGCC GGAGCGGGAG
GCGCAGATCC ATCGTCGTTT GGAGGGGCGG CATGGGGGGC CGTTGCCGGT GGAGGCGGTG
CATCGGATTT TTCGCGAGAT TATTTCGGCT TCGTTAAATT TGGAGAAGCA GCTTTCGGTG
GCCTATTTGG GGCCGGAGGC GACTTTTACG CACGAGGCGG CGTTGAAGCA GTTTGGGTCG
GCTTTTACGA TGTTTTCGAC CCGTACGATT ACCGAGGTGT TTCACGAGGT AGAGATTGGT
CGCGCCAATT TTGGGGTGGT TCCGGTGGAG AATTCGCTGG AGGGGGTGGT GATTCATACA
TTGGATCGTT TTGTGCGGTC GCCTTTGAAT ATATGTGGTG AGGTTTTGAT GCCGGTGGAG
CTTAATTTAC TGGCTCGGGG TGGGGTATTG GGTGAGGTAC GGGTCATTTA CGGTCATTTT
AGTGCGTTGG ATCAGTGTGC GCAGTGGCTT AGCCACTATT TACCGCAGGT TAAGCGGGTG
GAGGTTGCTT CGACGGCGGA GGCGGCGGAG CGGGCTCGGC GGGAGGAGGG GGCGGGGGCG
ATTTGTGGTC CTTTTGCGGC CAATCGTTAT GGATTGGTGG TGATCGCGGA GCATATTGAG
GATCAGGCGC GGTTGGAGAA TCGTTTTTTG GTGGTGGGTC GGGAGAGTCC GGCCCCTTCG
GGTGCGGACA AGACGAGCAT TATGGTTTCA TTTTTGGATG ATCCTGGTTT TTTGCATCGC
ATTCTTGGGG TCTTTGCGGA GCGAGGCATT AATTTAAGCC GCATTGAGTC GCGGCCTACG
CAGGAGCGGG CGTGGGATTA TCTTTTTTTT ATTGATATGG AGGGGCATCG TCAAGATGAG
GGGGTATCTG CTGCGTTGGA GGCGCTGGGG GCGTTATCTG GGGTATCGGT AAAGATTCTT
GGCTCATATC CACAACACGC GCTGTAG
|
|---|
| Protein sequence | MSHDPIDLNP STLVELRDGI DAIDDRIHDL LMKRAELVMR VGELKGKGPA GTPFYRPERE
AQIHRRLEGR HGGPLPVEAV HRIFREIISA SLNLEKQLSV AYLGPEATFT HEAALKQFGS
AFTMFSTRTI TEVFHEVEIG RANFGVVPVE NSLEGVVIHT LDRFVRSPLN ICGEVLMPVE
LNLLARGGVL GEVRVIYGHF SALDQCAQWL SHYLPQVKRV EVASTAEAAE RARREEGAGA
ICGPFAANRY GLVVIAEHIE DQARLENRFL VVGRESPAPS GADKTSIMVS FLDDPGFLHR
ILGVFAERGI NLSRIESRPT QERAWDYLFF IDMEGHRQDE GVSAALEALG ALSGVSVKIL
GSYPQHAL
|
|---|
| |