| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0174 |
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| Symbol | |
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| ID | 4481554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 189641 |
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| End bp | 190978 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639720919 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_864107 |
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| Protein GI | 117923490 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0062474 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCCATCCCGG ACGCACCATC CGTAGCGGCG CCACGCAAAA CCTCTCCGGC
ACCATCCGCC CCGCCGCCGA TAAATCCATC TCCCACCGCT CCGTGATCTT TGGCGCCCTG
GCCGAAGGCG AAACCCACGT TAAAGGCATG CTGGAAGGCG AAGATGTGCT GCGTACCATC
ACCGCCTTTC GTACCATGGG TATCTCTATC GAACGCTGCA ACGAAGGTGA ATACCGCATC
CAAGGCCAAG GACTCGACGG CCTAAAAGAA CCCGATGACG TGCTGGATAT GGGTAACTCC
GGTACCGCCA TGCGCCTGCT GTGCGGCCTG CTGGCCAGCC AACCCTTTCA CTCTATCCTC
ACCGGCGATC ACTCCCTACG CAGCCGCCCC ATGGGCCGCG TAGTGCAACC CCTAACCAAA
ATGGGCGCTC GCATCCGTGG CCGCGACGGT GGCCGCCTGG CCCCCCTCGC CATCGAAGGC
ACTGAACTGG TACCCATTAC CTACAATAGC CCCATCGCCT CGGCCCAAGT GAAGTCCGCC
ATTATCCTGG CCGGACTCAA TACCGCCGGC GAAACCACCA TCATTGAACC CGCCGTCAGC
CGCGACCACA CCGAACGTAT GCTCATCGCC TTCGGTGCCG AAGTGACCCG CGATGGCAAC
CAAGTGACCA TCGAAGGCTG GCCCAACCTG CAAGGCCAAG AGATCGAAGT GCCCGCCGAT
ATCTCCGCCG CCGCCTTCCC CATGGTGGCC GCCCTTATCA CCCCAGGATC TGATATTATC
CTGGAAAATG TGGGTATGAA CCCAACCCGT ACCGGTATTC TCGACCTGCT CCTGGCTATG
GGCGGCAATA TCCAACGCCT CAACGAACGG GAAGTTGGCG GCGAACCCGT GGCCGACCTA
CAGGTGCGCT ACTCCCAACT CCAAGGCATC GAGATAGACC CCACCGTGGT GCCCCGTGCC
ATTGATGAGT TCCCCGTGTT TTTTGTAGCC GCCGCCCTCG CCCAAGGCCA AACCCTGGTG
CAAGGCGCCG AAGAGCTGCG CGTTAAAGAG AGCGACCGCA TCACCGCCAT GGCCAACGGT
CTTAAAGCCC TAGGTGCCAT CATAGAAGAA CGCCCCGATG GCGCACTTAT TACCGGAAAT
CCCGACGGTC TGGCCGGTGG GGCCAGCGTA GACTCCTTTA CCGACCACCG TATCGCCATG
AGCCTGCTGG TGGCCGGCCT GCGCTGTAAA GAGTCCGTAT TGGTGCAACG CTGCGATAAT
ATCAATACCT CCTTTCCCAG CTTTTCCCAA TTAATGAACA GTCTTGGTTT TCAATTGGAG
GATGTCAGCC ATGGCTGA
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| Protein sequence | MSSTHPGRTI RSGATQNLSG TIRPAADKSI SHRSVIFGAL AEGETHVKGM LEGEDVLRTI
TAFRTMGISI ERCNEGEYRI QGQGLDGLKE PDDVLDMGNS GTAMRLLCGL LASQPFHSIL
TGDHSLRSRP MGRVVQPLTK MGARIRGRDG GRLAPLAIEG TELVPITYNS PIASAQVKSA
IILAGLNTAG ETTIIEPAVS RDHTERMLIA FGAEVTRDGN QVTIEGWPNL QGQEIEVPAD
ISAAAFPMVA ALITPGSDII LENVGMNPTR TGILDLLLAM GGNIQRLNER EVGGEPVADL
QVRYSQLQGI EIDPTVVPRA IDEFPVFFVA AALAQGQTLV QGAEELRVKE SDRITAMANG
LKALGAIIEE RPDGALITGN PDGLAGGASV DSFTDHRIAM SLLVAGLRCK ESVLVQRCDN
INTSFPSFSQ LMNSLGFQLE DVSHG
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