| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0168 |
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| Symbol | |
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| ID | 4481548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 182103 |
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| End bp | 183233 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639720913 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_864101 |
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| Protein GI | 117923484 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC CCGATGCTGG TAAAGATCGC GCCTATATGG ACCACGCCTT ACGTTTGGCC
GCACGCGGCC TAGGGCGCAC ACGACCCAAC CCTACCGTGG GCTGTGTGAT TGTAAAAGAG
GATCGCATCA TCGGCAGAGG GTGGCACCGC AAGGCTGGCG GCCCCCATGC TGAGGTTGAG
GCTCTGCGTA TGGCCGGCGA GGCGGCCCGT GGGGCTACCG CTTATGTGAC CCTGGAACCA
TGCAGTCATC ATGGCCGCAC ACCACCCTGC TGTGAAGGGC TGATTAAAGC AGGCATTCGG
CGGGTGGTGG CTGCCATGGA AGATCCGAAT CCGCTGGTCT CTGGTCAGGG TTTTCAACGC
TTGAAACAGG CGGGGGTGGT GGTGCAGGTA GGGGTGCGGG AAGAAGCCGC CCAGATGTTG
ATCCGTCCGT TTATTACCCG TATTTTGCAC AATCGACCCA TGGTTACGCT GAAATCGGCG
GCCTCTCTGG ATGGTAAAAC CGCTACCCGC GAGCGCCATA GCCAGTGGAT TACTGGCGAA
GCTGCCCGTA AACGAGGCCA CCGTTTGCGC GATACCCATG ATGTGATTTT AACCGGCATT
CAAACCGTGC TGGCGGATGA TCCACGACTT ACCTGCCGGT TAAAGGGGGG ACGGGATCCA
ATCCGGGTTG TGGTGGACAG CAGCTTAAAA CTTTCTGAAA ATGCGGGGGT TATCAATCCT
GACTCCACCG CGCCGGTATG GGTGGCCACC ACCTTACGGG CTCCAGAGGA GAAGCGTGCG
CTGTTTGCTT TGCTGCCCGG CGTTGAGGTG ATCATGTGCG CCGAGGATGA TACAGGACGG
GTAGATCTTT ACGATCTGAT GGAAAAATTG GCGAAGCGCG AGATTACCAG CGTGTTGGCT
GAGGCTGGTG GTGTATTATC CGGTGCTTTA TTGGACAAAA GGCTGGTGGA CCGGATTGCG
CTGTTCATGG CCCCGATGTT GATTGGTGGA CGTGAGGCGT CGGGTATATT GGATAGCTTG
GGGGCGGCTA AATTGACGGA AGCACCGCGA TTGGACCATG TTACCCTGAC CTCGCTGGAT
GGGGATCTGT TGGTTGAGGG CTGCGTGGTG TATGGTGCCA CCGAAGGCTA A
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| Protein sequence | MAKPDAGKDR AYMDHALRLA ARGLGRTRPN PTVGCVIVKE DRIIGRGWHR KAGGPHAEVE
ALRMAGEAAR GATAYVTLEP CSHHGRTPPC CEGLIKAGIR RVVAAMEDPN PLVSGQGFQR
LKQAGVVVQV GVREEAAQML IRPFITRILH NRPMVTLKSA ASLDGKTATR ERHSQWITGE
AARKRGHRLR DTHDVILTGI QTVLADDPRL TCRLKGGRDP IRVVVDSSLK LSENAGVINP
DSTAPVWVAT TLRAPEEKRA LFALLPGVEV IMCAEDDTGR VDLYDLMEKL AKREITSVLA
EAGGVLSGAL LDKRLVDRIA LFMAPMLIGG REASGILDSL GAAKLTEAPR LDHVTLTSLD
GDLLVEGCVV YGATEG
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