| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0092 |
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| Symbol | |
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| ID | 4481093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 95540 |
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| End bp | 95830 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639720839 |
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| Product | integration host factor, alpha subunit |
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| Protein accession | YP_864027 |
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| Protein GI | 117923410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATGA CCAAAGCGGA TATCGTGCAG ACAGTGTATC AACGGCTTGG GCTTTCTAAG
AAAGAGTCGG CGGACATTGT GGAATCGGTC TTCGAACTTA TTAGGAATCA ACTGGAAAAC
GGAGATCCGG TCAAAATATC CGGGTTTGGT AATTTCACCA TGCGGGAGAA AAATCCCCGT
CAGGGCCGTA ACCCAAAAAC CGGTGAAGAG GTGGAAATCT CTGCCCGTCG GGTGGTGACG
TTTAAAGCCA GTCAGATCCT GCTGAACAAA GTCAATAATG GTAAGGGCTA A
|
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| Protein sequence | MTMTKADIVQ TVYQRLGLSK KESADIVESV FELIRNQLEN GDPVKISGFG NFTMREKNPR
QGRNPKTGEE VEISARRVVT FKASQILLNK VNNGKG
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