| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0090 |
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| Symbol | |
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| ID | 4481091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 93846 |
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| End bp | 94439 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639720837 |
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| Product | shikimate kinase |
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| Protein accession | YP_864025 |
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| Protein GI | 117923408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCT GCCTGATTGG GATGCGTGGT TCGGGTAAAT CCAACCTCTC CCGGCGTTTG
TCGGTGCTTA CCAAACGCAC GGTGTTCTCT ACCGATGCCC TGATAAGCTA TGAACAGGAG
GGGCAATCCA TTGAAGAGAT CGTGCGGAAC GCCGCCCGTG GCTGGCACGA TTTTCGGGAT
TTAGAGTACC AAGTGGTACG TCGCGCGGCC CGCATGCAGG GGGTGATTAT CGACTGTGGT
GGTGGTGTGA TTGTGGATCT GGATAGCCAG GGTAGTGAGG TCTACAGCAG CCGCAAGGTT
GGTGCCCTCA AGCGCAGCGG CATTGTGGTG TGGCTGCGGG GGGATGTGGA CCGCTTGGTG
CAAAAAGCTC AGACCAAAGC CATGGCTGAA GATCCCAACC GGCCCCAGTT GGATACCACA
CAATCCCTAA AAGCCTTGAT GGAACACCGA CTGCCCTTCT ATGAAAAAGC TGCCGATATC
ATTTTGGATA TTGACGGCAA AAAACGCCGG GATTTGGCGG TTGAGTTGAT GAAACGGACC
TCCGATGCGG CTTGGCACAG TATGGTTATG CGTCGCGGTC AAGAGTTGGA TTGA
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| Protein sequence | MNICLIGMRG SGKSNLSRRL SVLTKRTVFS TDALISYEQE GQSIEEIVRN AARGWHDFRD
LEYQVVRRAA RMQGVIIDCG GGVIVDLDSQ GSEVYSSRKV GALKRSGIVV WLRGDVDRLV
QKAQTKAMAE DPNRPQLDTT QSLKALMEHR LPFYEKAADI ILDIDGKKRR DLAVELMKRT
SDAAWHSMVM RRGQELD
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