Gene Mmc1_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0086 
Symbol 
ID4483656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp91595 
End bp92116 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content54% 
IMG OID639720832 
Productflagellar protein FliS 
Protein accessionYP_864021 
Protein GI117923404 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.639004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACG GTCTTCGCAG CTATAAAAGT TCTCGTGCCA ACACCGCATC GCGGGAGGAT 
CTGTTGATCC TGCTTTATGA GGGGGCGATA CGATTTTTAG AGAAGTCGCT TCAGGCGCAT
ACGGCTGGTA CTCTTTCCGA ACACAAAATG ATGTTGCAGC GGGCAATGGC GATTATCAGT
GAGCTGCAAA ACACCCTTGA TTTTGAAAAG GGTGGCGATC TGGCCATGCA GTTGTTTGAT
CTGTACAACT ACATGTTGGA TCGTTTGACC AAAGCCAACA TCAACCGGGA CATGAGTGCG
ATTAGTGAAG TGATCGAGCA CCTGAATGTA CTGTTGGATG GTTGGCGCCA AGCGGTGGCG
CAGGTTAAGC GTCAGGGTGG CATGGCGGCT TTGGTGGCCA ATGGTGGCAG TGCGTCGACA
GACCCGGTAG ATACGGTGAC GGCGAGCAAG CCTGTGGCAC CACGCCCTCA GCAAAAAGCG
CCTGGGGCTC TGCCGCGTCT GTCGCGTCCA CAGGTGTTGT AG
 
Protein sequence
MSYGLRSYKS SRANTASRED LLILLYEGAI RFLEKSLQAH TAGTLSEHKM MLQRAMAIIS 
ELQNTLDFEK GGDLAMQLFD LYNYMLDRLT KANINRDMSA ISEVIEHLNV LLDGWRQAVA
QVKRQGGMAA LVANGGSAST DPVDTVTASK PVAPRPQQKA PGALPRLSRP QVL