Gene Mmc1_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0081 
Symbol 
ID4483651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp87557 
End bp88045 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID639720827 
Producthypothetical protein 
Protein accessionYP_864016 
Protein GI117923399 
COG category[S] Function unknown 
COG ID[COG1699] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.171449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTC AGGGAACACG CTTCGGTACG CTGGAGTTTG ATGAGAAGGA AATCATTTAC 
CTGAACGAAG GGCTGTTGGG CTTTCCGCTC TCTAAGCAGT TCCTGATGTT CCCTTATGGT
GAGGACTCCT CCTTCTTTTG GTTGCAATCG GTGGATGAGC CAGAGATTGC GTTTATCGTA
ATCAATCCAT TTGATTTCTT CTCCGACCTG GAGTTCGCGG TAGAAGATGA AGATGCCTCA
TCTCTGGTAT TGGCCCGTAG TGAGGATGTG GAAATTTTTA CGTTGGTAAC CATTCCCGAG
GGTCGTCCCG AGGAGATGCG TACCAACTTG GCGGGTCCTG TGGTGGTCAA TGTGCAAAAC
CGCCTGGGTA AGCAGATTTT GTGTAAGGAC TATTCGCCGC GTCAACCGCT GATTCCTGAC
TCGATGCGTT CCCAGCTCAA GGAGCAGGCA CGTTCGAGTA AGGGCGGTCA CGTCGCTGGC
GGTCGTTAG
 
Protein sequence
MEIQGTRFGT LEFDEKEIIY LNEGLLGFPL SKQFLMFPYG EDSSFFWLQS VDEPEIAFIV 
INPFDFFSDL EFAVEDEDAS SLVLARSEDV EIFTLVTIPE GRPEEMRTNL AGPVVVNVQN
RLGKQILCKD YSPRQPLIPD SMRSQLKEQA RSSKGGHVAG GR