Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0063 |
Symbol | |
ID | 4482384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 67016 |
End bp | 67822 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639720809 |
Product | flagellin domain-containing protein |
Protein accession | YP_863998 |
Protein GI | 117923381 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.028485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTGA GTGTTAATCC CAACGCCTTT TGGTTAAACG CACAGCAGTC GGTCAACGGA TCGGCGTTGG GGATCGGCAA GAGTACGGAA CAGCGGACCA GCAGTAAGCG TGCGCATGTC GCTAAGCAGG ATCAACAGGT GTTGGCGGCG GCGGCGATGA CAGCCAAGGT GCGTGAACGC AATCAGGAGT CCCACGCGAC CAATGATGGG ATCTCCGTTA TTCAGGTAGC GCAGGAGGCG CTGTATCAAA CCACATCCAC ACTAGAGAAG GTGCGTTGTC TAACGCAGGT GTTGGAGGAT GGGGGGGTAG CGCAGCAAAA GGAAGGGGTT TGTGAGCAGA TAGAGGTGCT GTTGGCAGAG ATTGATCGTA TTGCCGCCCA GACGGTTTTT AATCAGCAAA CGCTGATTTC AACAGGGGGG TGGACCGGGA TTGTCGATTT GGCACCGCAC CAAGTGATCT GTTTGACCGT AGGTAGTGCC ACACAGCGGG CATTGGGGTT GGATGAGATG GACCTTTCCG AACGCCAAGG GCAGAAGGTG GAAGGGGTGC TCAAGCAGGT GGATAACGCC ATGACCAGTG TGGCGGATAT GCGGGCGCAA TTAGGGGATA TGCAGGTTCG TTTTAAAGAG ATCATTGAGC AAATTGCCCA GGTGGAGGCT AAGAACGGAG GGGTAAGGAT TCGGAGTGCG CAGGTTGCCA GGGAGGCGGC CTTGCACGTG AAGGGATCCA TCCAGATTTT TTCGGACCGT TCGATTGTGG CGCAGGCCAA CCAACAGCCT TTGTTGGCGG TTAATTTGAT GAATTAG
|
Protein sequence | MALSVNPNAF WLNAQQSVNG SALGIGKSTE QRTSSKRAHV AKQDQQVLAA AAMTAKVRER NQESHATNDG ISVIQVAQEA LYQTTSTLEK VRCLTQVLED GGVAQQKEGV CEQIEVLLAE IDRIAAQTVF NQQTLISTGG WTGIVDLAPH QVICLTVGSA TQRALGLDEM DLSERQGQKV EGVLKQVDNA MTSVADMRAQ LGDMQVRFKE IIEQIAQVEA KNGGVRIRSA QVAREAALHV KGSIQIFSDR SIVAQANQQP LLAVNLMN
|
| |