| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0025 |
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| Symbol | |
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| ID | 4480711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 27100 |
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| End bp | 28170 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639720771 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_863960 |
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| Protein GI | 117923343 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA AACACCGCTT TATCCAAGCC TGTTTTCGTC AGCCTGTAGA CCGCACGCCT
ATTTGGTTAA TGCGTCAAGC GGGGCGTTAT CTGCCGGAGT ATCGGAAAAC ACGGGCACAG
GCTGGGGATT TTATGGCGTT GTGCAAAAAT ACAGAGTTGG CAACTGAGGT GACGATGCAG
CCCATTCGCC GGTATGGGTT GGATGCGGCG ATTCTGTTTT CGGATATTTT GGTCATTCCT
GAAGCGATGG GTATGGATGT TCGGTTTGCC ACGGGGGAGG GTCCTCTTTT GGATCCGCCG
GTGCGTGTGC ATGGAGATAT TGAAAAGCTT ATACATACCG ATCCAGAGGA TAGTTTGGAT
TATGTGATGC GGGCGGTGGC CTCGATTCGT AAGGCGTTGA ACGAGGAGAT CCCTTTGATT
GGTTTTTCGG GTTCTCCTTG GACGTTGGCG ACCTATATGG TGGAGGGGGG GTCGAGTAAG
ACCTTTGGTT TGGTTAAGGG CATGCTCTAT GACGCGCCAG AGTCGATGCA TCTGCTGCTG
GACAAGTTAG CAGATATGGT GGCGGCCTAT TTAAATGCGC AGATTAGACA TGGCGCACAG
GCGGTGCAGA TTTTTGATAC CTGGGGTGGG GTATTGAGTC AGCCGACTTT TAGGGAATTT
TCGTTGCGCA GCATGAAGGC GGTGGTGGAT CGTTTGGATC GGACCAATAG CGCGGGTGAG
CGGATACCGG TGATTCTGTT TGCCAAGGGT TGCAACGCCA TGGTGGAAGA TATTGCGCAG
AGTGGTTGTG ATGTAGTGGG TCTGGATTGG ACCTCGGAGA TTGGTCCATT AAGGGAACGG
ATTGGTCATA AGGTTGCCTT ACAGGGCAAT ATGGACCCTG CGCTGTTGTA TGCATCGCCA
GAGCGTATCG CTCAAGGTGC GCGGGAGGTT TTGCAGGCGT TTGGGCCGCA TCCGGGACAT
ATCTTTAATT TGGGGCATGG CATGGCACCG GATATGAGCC CGGATCATGT TGAAGCGTTG
GTAAGGGCGG TAAAGGAAGA GGGCTTGAAA ATTCATCAGG GAGTAGCGTG A
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| Protein sequence | MKSKHRFIQA CFRQPVDRTP IWLMRQAGRY LPEYRKTRAQ AGDFMALCKN TELATEVTMQ
PIRRYGLDAA ILFSDILVIP EAMGMDVRFA TGEGPLLDPP VRVHGDIEKL IHTDPEDSLD
YVMRAVASIR KALNEEIPLI GFSGSPWTLA TYMVEGGSSK TFGLVKGMLY DAPESMHLLL
DKLADMVAAY LNAQIRHGAQ AVQIFDTWGG VLSQPTFREF SLRSMKAVVD RLDRTNSAGE
RIPVILFAKG CNAMVEDIAQ SGCDVVGLDW TSEIGPLRER IGHKVALQGN MDPALLYASP
ERIAQGAREV LQAFGPHPGH IFNLGHGMAP DMSPDHVEAL VRAVKEEGLK IHQGVA
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