Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0015 |
Symbol | hslU |
ID | 4480642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 17290 |
End bp | 18675 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639720761 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_863950 |
Protein GI | 117923333 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGT TTACCCCCCG TGAGATTGTT TCGGAGTTGG ATCGTTATAT TATTGGTCAG AACATGGCAA AGAGGGCGGT AGCCATTGCA TTGCGCAATC GTTGGCGGCG TCAGCGCTTG AGTGCGGAGA TGCGGGAGGA GGTCTATCCC AAAAACATTC TCATGATCGG GCCAACGGGT GTGGGCAAGA CGGAGATTGC GCGTCGATTG GCCAAGTTGG CGCGTGCGCC GTTTATTAAG GTTGAGGCGA CCAAATTTAC CGAGGTTGGT TATGTGGGCC GGGATGTTGA GTCCATTGTG CGGGATTTGG TGGAGATGGG CATAACCATG GTAACGGAGG AGGCCAAGGT TAAGGTGCAG TTTCAGGCCG AAGATCAGGC TGAGGAGCGG TTACTGGATA TTTTATTGCC TTTACCGAGC ACGGGTCAGG GTGAGGGTAG CGCTCATTTT GGTCTGTTTG GTCAGATGGA GGGTTCATCG GTCAAGCCAG AGCCTACGGC GCAGCAGAAG GAGAGCCGTC AAAAGATGCG CAAAATGCTG CGGGAGGGCA AATTGGATGA CCGGGAGATC GACATTGATT TAAAGGAGCA GCGGCGGGTG CCGATGATGG AGGTGATTAC ACCTCAGGGT ATGGAGGGGA TTAATTTACA GGATATGTTG GGCGGATTGA TGGGGGGGCG CACCAAGACC CGGCGGGTCA AGGTGGGAGA GGCCATGAAG TTGCTCACGG AAGAAGAAGC GGGCAAGTTG GTGGATCAAG ATACGGTGCA GCAGGTAGCC ATTGAGCGGG TGGAGCAGTC GGGCATTGTC TTTTTGGACG AACTGGACAA AGTGTGCGCG CGGGGGAGTG AAACACGGGG CGGGGATGTA TCCCGCGAGG GTGTGCAGCG TGATCTTTTG CCTTTGGTGG AGGGCACCAC GGTATCGACC AAGTATGGCA TGGTTAAGAG TGACCATATT CTTTTCATTG CGTCGGGTGC GTTTCAATTA GCCAAGCCGT CGGATTTATT ACCGGAGTTA CAGGGTCGTT TACCGATTAG GGTTGAGTTA GAGAGTTTGG GCAAGGGGGA GTTTGTACGT ATTTTGACGG AGCCAGAGAA CGCGTTGACA CGTCAGTATG CGGCGCTGAT GGGGGTTGAA AACATCGAGT TGGTTTTCAC GGATGAGGGT ATTGAGGCGT TGGCAGAGAT CGCCACCCGG GTGAACGAGA CGGCGGAGAA TATTGGGGCG CGTCGTTTGC ACACGGTGAT GGAGAAGTTA TTGGATGAGT TATCATTCAG TGCGCCAGAT CGTGGTGGTG AGCGGGTTGT GATTGATGCG GCGTATGTAA ACCGTCAATT GAGCGATTTG GCGGCGGATG AGGACCTTTC GCGCTTTATC CTGTAG
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Protein sequence | MSEFTPREIV SELDRYIIGQ NMAKRAVAIA LRNRWRRQRL SAEMREEVYP KNILMIGPTG VGKTEIARRL AKLARAPFIK VEATKFTEVG YVGRDVESIV RDLVEMGITM VTEEAKVKVQ FQAEDQAEER LLDILLPLPS TGQGEGSAHF GLFGQMEGSS VKPEPTAQQK ESRQKMRKML REGKLDDREI DIDLKEQRRV PMMEVITPQG MEGINLQDML GGLMGGRTKT RRVKVGEAMK LLTEEEAGKL VDQDTVQQVA IERVEQSGIV FLDELDKVCA RGSETRGGDV SREGVQRDLL PLVEGTTVST KYGMVKSDHI LFIASGAFQL AKPSDLLPEL QGRLPIRVEL ESLGKGEFVR ILTEPENALT RQYAALMGVE NIELVFTDEG IEALAEIATR VNETAENIGA RRLHTVMEKL LDELSFSAPD RGGERVVIDA AYVNRQLSDL AADEDLSRFI L
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