Gene Mmc1_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0005 
Symbol 
ID4480632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp5220 
End bp5909 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content49% 
IMG OID639720751 
Producthypothetical protein 
Protein accessionYP_863940 
Protein GI117923323 
COG category 
COG ID 
TIGRFAM ID[TIGR02646] conserved hypothetical protein TIGR02646 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCACG TCAAACACAC AGCGTCTCTC ACCAAGCTAG ACCGTGCAAA GACTAAAGAT 
CCTTGCCCGA CAGATCCAGC AAAAGCTTGG AGAGGCTTTA AACATAAAGA CGATGTGGCC
AAACAACTTA AACTCCTGCA AGACGGCCTT TGTGCCTACT GTCAAGTGAG TTTGGACACG
GAGCTTGGCT ACCATATCGA TCATATTCAG CCAAAGGGTC CCAACCCTAA GCAAACTTTT
GTCTGGCACA ATCTGGTACT CTCTTGCATA GCAAGTGGAT CCCAAGGTGC GGTGAGCGGA
AAGCTCAGTT GTGGTCACGC TAAAGGCAAT CAAGCGTTAC CTAAGGATAT GGACCCCACG
CACCCTGACT GTGAATCACT CTTTACGTAC ACCCTTTCGG GTAAGGTTGA GCCCAATCCA
GATCGCCCCC CCGAGCAGGT GGAGGACATT AAAAAAGCGA TCGAATTGTT GAACCTCAAC
AACAAACGGC TGGTTCGCGA GCGGGCCGAG ATGTTGCATG AAGGTTATCT ATGTTTAAAA
GATCTTAACG GGAGTGCCGT TGCCCATTTC CTGGATTTGG AACTGGGAAA AACCAACGGA
AAACACAGGG CATTTATCAC GGCCCGCAAA CTGCACTTTC AAGATTGGCC ACACGTTGAG
CCCATCGACA ACACGCTTGA AGAGAGATGA
 
Protein sequence
MRHVKHTASL TKLDRAKTKD PCPTDPAKAW RGFKHKDDVA KQLKLLQDGL CAYCQVSLDT 
ELGYHIDHIQ PKGPNPKQTF VWHNLVLSCI ASGSQGAVSG KLSCGHAKGN QALPKDMDPT
HPDCESLFTY TLSGKVEPNP DRPPEQVEDI KKAIELLNLN NKRLVRERAE MLHEGYLCLK
DLNGSAVAHF LDLELGKTNG KHRAFITARK LHFQDWPHVE PIDNTLEER