Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0001 |
Symbol | |
ID | 4480628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 181 |
End bp | 1524 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639720747 |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_863936 |
Protein GI | 117923319 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATT TTTGGTCCAA AGCGATGGAC GCGGTGGCCG AGCAGGTCTC GGTCCAGGTG TTTGAGGCAT GGATACGCCC CCTGAAAGCA GGGGGTGAGG TGGGCGATGG CCAATTTCAG GTCTACGCGG CCAACGATTT TTCTGCCGAT TGGGTAAAAA AACGCTATGG CGGATTGCTG GAAGAGATTT TAAGCGAACA GCTTGGGGAG CCTGTCACCC TGTTGTTTGC GGCGGACCCT GCCTTGGAAA AACCGGTCGC CTCCAAAACC CAGACCGTCA CCCCGGTGCA GAGCGGTGGT GAAACGGGCG ATCAAGAGAA CTTTCATAGC GGCCTTGACC CCCGCTATAC CTTTGACAGC TTTGTGGTGG GGGGCTGCAA CCAGTTTGTT CACGCCGCCG CCGCCCGCGT GGCCGAAGCC CCAGCCGCCG CCTACAACCC CCTGTTTATT CACGGTGGGG TTGGCCTAGG CAAAACCCAC GTGATGCAGG CGATCGGCAA TCGGGTATTG GAGATCGACC CCGACAAGCG GGTACTCTAT ATCTCTTCAG AAAACTTTAT GACCCAGCTT ATCAACTCCC TGCGTTTTAA GCGGGTATTT GATTTTAAAG AAAATTTTCG CTCGGTCGAT GTGCTGCTGG TGGATGATAT TCAGTTTATT GCGGGTAAAA AGGCGACCCA GGAGGAGTTT TTTCACACCT TCAATGCCCT CTATGAGGCT AAAAAGCAGA TTGTCATGAC CGCAGACAGC TTTCCCCATG AAATTGAACA TTTAGAGGAG CGTCTGCGCT CCCGCTTTGG CATGGGGCTG GTGGCCGATA TGCAACCACC AGATCTGGAA ACCCGGGTGG CCATTTTACA AAAAAAGGCA GGCAGCGAAG GGCTTAGATT GGCCGACGAG GTGGCCTTTT TTCTGGCTGA TGCGGTACAG ACCAACGTGC GGGAGCTGGA AGGGGCCTTG ATTCGGGTTT CGGCCTACGC CTCACTGACC GGCAAGCCCA TTACCATGGC GCTGGTCAAG GAGTCGTTGA AGGATATCGT GCGGGGGCAG GATCGGGCGG TCACGGTGGA GCAGATTCAA AAGACGGTCG CCAATTATTA TAAGGTCAAG GTTACGGATC TCTGCTCCAA CAGCCGTTCG CGCATCTACA GCCACCCCAG GCAGATTGCG ATGTATCTGT GCAAACAGCT TACCCAGCAC TCTTATCCAG AGATTGGGCA CCGTTTTGGA GGCCGCGACC ACACCACGGT ACTCTACGCG GTGAGTCAGG TGGATAAAAA ACAGGGCAGC ACCCCGGCCT TGGCCGATGA GTTGGCATCT CTGAAGAGCA TGTTGCAAAA ATAA
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Protein sequence | MQDFWSKAMD AVAEQVSVQV FEAWIRPLKA GGEVGDGQFQ VYAANDFSAD WVKKRYGGLL EEILSEQLGE PVTLLFAADP ALEKPVASKT QTVTPVQSGG ETGDQENFHS GLDPRYTFDS FVVGGCNQFV HAAAARVAEA PAAAYNPLFI HGGVGLGKTH VMQAIGNRVL EIDPDKRVLY ISSENFMTQL INSLRFKRVF DFKENFRSVD VLLVDDIQFI AGKKATQEEF FHTFNALYEA KKQIVMTADS FPHEIEHLEE RLRSRFGMGL VADMQPPDLE TRVAILQKKA GSEGLRLADE VAFFLADAVQ TNVRELEGAL IRVSAYASLT GKPITMALVK ESLKDIVRGQ DRAVTVEQIQ KTVANYYKVK VTDLCSNSRS RIYSHPRQIA MYLCKQLTQH SYPEIGHRFG GRDHTTVLYA VSQVDKKQGS TPALADELAS LKSMLQK
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